Variant report

Variant	rs3747671
Chromosome Location	chr3:195635257-195635258
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	HDAC2	chr3:195633738-195635772	MCF-7	breast:	n/a	n/a
2	POLR2A	chr3:195635256-195635371	MCF10A-Er-Src	breast:	n/a	n/a
3	POLR2A	chr3:195633615-195635701	GM12878	blood:	n/a	n/a
4	MXI1	chr3:195634465-195637159	SK-N-SH	brain:	n/a	chr3:195635673-195635682 chr3:195634896-195634905
5	TEAD4	chr3:195634654-195635470	K562	blood:	n/a	n/a
6	USF2	chr3:195633730-195635453	GM12878	blood:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910
7	E2F6	chr3:195634713-195635543	K562	blood:	n/a	n/a
8	MYC	chr3:195634657-195635420	K562	blood:	n/a	chr3:195634895-195634904
9	POLR2A	chr3:195634478-195635357	GM12878	blood:	n/a	n/a
10	GATA3	chr3:195633854-195635601	MCF-7	breast:	n/a	chr3:195634918-195634925 chr3:195634778-195634791 chr3:195634297-195634306
11	ELF1	chr3:195635113-195635474	K562	blood:	n/a	n/a
12	MAX	chr3:195634661-195635313	K562	blood:	n/a	chr3:195634895-195634904
13	CTBP2	chr3:195635012-195635571	H1-hESC	embryonic stem cell:	n/a	n/a
14	ZNF143	chr3:195635086-195635438	H1-hESC	embryonic stem cell:	n/a	n/a
15	MAX	chr3:195632889-195635444	GM12878	blood:	n/a	chr3:195634895-195634904
16	POLR2A	chr3:195633042-195635567	GM12878	blood:	n/a	n/a
17	SIN3A	chr3:195634618-195635629	H1-hESC	embryonic stem cell:	n/a	chr3:195634894-195634903 chr3:195634896-195634905
18	MAX	chr3:195634688-195635403	K562	blood:	n/a	chr3:195634895-195634904
19	UBTF	chr3:195635042-195635538	K562	blood:	n/a	n/a
20	NFIC	chr3:195634416-195635491	ECC-1	luminal epithelium:	n/a	n/a
21	POLR2A	chr3:195633549-195635535	GM12892	blood:	n/a	n/a
22	TBP	chr3:195635257-195635593	H1-hESC	embryonic stem cell:	n/a	n/a
23	TCF12	chr3:195634544-195635492	ECC-1	luminal epithelium:	n/a	n/a
24	TAF1	chr3:195635165-195635478	H1-hESC	embryonic stem cell:	n/a	n/a
25	USF1	chr3:195634561-195635344	HCT-116	colon:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
26	CTCF	chr3:195635120-195635270	GM12864	blood:	n/a	n/a
27	ELF1	chr3:195633697-195635589	MCF-7	breast:	n/a	n/a
28	KAP1	chr3:195634520-195635508	HEK293	kidney:	n/a	n/a
29	BHLHE40	chr3:195632762-195635654	GM12878	blood:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910
30	MAX	chr3:195633785-195635632	MCF-7	breast:	n/a	chr3:195634895-195634904
31	POLR2A	chr3:195632833-195635385	GM12878	blood:	n/a	n/a
32	USF1	chr3:195634614-195635606	ECC-1	luminal epithelium:	n/a	chr3:195634894-195634903 chr3:195634893-195634906 chr3:195634895-195634904 chr3:195634896-195634905 chr3:195634895-195634904 chr3:195634889-195634910 chr3:195634894-195634905
33	POLR2A	chr3:195634073-195635460	PBDE	blood:	n/a	n/a
34	POLR2A	chr3:195633232-195635540	GM15510	blood:	n/a	n/a
35	MAX	chr3:195634575-195636997	ECC-1	luminal epithelium:	n/a	chr3:195634895-195634904
36	POLR2A	chr3:195635104-195635634	H1-neurons	neurons:	n/a	n/a
37	CTCF	chr3:195635180-195635330	SK-N-SH_RA	brain:	n/a	n/a
38	MAZ	chr3:195633612-195635296	GM12878	blood:	n/a	chr3:195634895-195634904
39	MYC	chr3:195635252-195635341	HepG2	liver:	n/a	n/a
40	RELA	chr3:195632840-195635322	GM19099	blood:	n/a	n/a
41	E2F6	chr3:195634490-195635578	K562	blood:	n/a	chr3:195634703-195634715
42	RELA	chr3:195632867-195635393	GM18951	blood:	n/a	n/a
43	MAX	chr3:195634724-195635391	NB4	blood:	n/a	chr3:195634895-195634904
44	E2F6	chr3:195635090-195635346	K562	blood:	n/a	n/a
45	POLR2A	chr3:195633637-195635749	HL-60	blood:	n/a	n/a
46	ZNF143	chr3:195634803-195635421	K562	blood:	n/a	n/a
47	POLR2A	chr3:195633119-195637008	GM19193	blood:	n/a	n/a
48	MAX	chr3:195633766-195635325	MCF-7	breast:	n/a	chr3:195634895-195634904
49	POLR2A	chr3:195632863-195637021	GM19099	blood:	n/a	n/a
50	MXI1	chr3:195634681-195637229	IMR90	lung:	n/a	chr3:195635673-195635682 chr3:195634896-195634905

No.	Distal block	Cell Line	Cell type
1	chr3:195409239..195411118-chr3:195634886..195637681,2	K562	blood:
2	chr3:195602309..195605964-chr3:195633937..195639111,7	MCF-7	breast:
3	chr3:195634985..195639388-chr3:195640414..195643668,6	K562	blood:
4	chr3:195586183..195589245-chr3:195634778..195636892,3	MCF-7	breast:
5	chr3:195601233..195610120-chr3:195632410..195638442,11	MCF-7	breast:
6	chr17:57922900..57925382-chr3:195635106..195637733,2	MCF-7	breast:
7	chr3:195623300..195626521-chr3:195635118..195637851,4	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MUC20-3	chr3:195634947-195635649	ENSG00000224614

Variant related genes	Relation type
ENSG00000226155	TF binding region
ENSG00000223783	Chromatin interaction
ENSG00000242086	Chromatin interaction
ENSG00000061938	Chromatin interaction
ENSG00000201524	Chromatin interaction
ENSG00000273009	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 4 )

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1871529	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs3747672	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs6421308	1.00[ASW][hapmap];0.96[CEU][hapmap];0.91[CHB][hapmap];0.86[CHD][hapmap];0.98[GIH][hapmap];0.82[JPT][hapmap];1.00[LWK][hapmap];0.96[MEX][hapmap];0.82[MKK][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs745497	0.89[CEU][hapmap];0.88[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs881753	0.89[TSI][hapmap]
rs9829709	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs9834833	0.80[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs9871110	0.92[CEU][hapmap];0.91[CHB][hapmap];0.91[CHD][hapmap];0.98[GIH][hapmap];0.86[JPT][hapmap];0.91[MEX][hapmap];0.91[TSI][hapmap];0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:35 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv1001387	chr3:195186128-195661538	Bivalent Enhancer Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	49 gene(s)	inside rSNPs	diseases
3	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
4	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
5	nsv1006217	chr3:195312401-195643229	Enhancers Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
6	nsv536882	chr3:195312401-195643229	Enhancers Flanking Active TSS Active TSS Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	38 gene(s)	inside rSNPs	diseases
7	esv2757913	chr3:195379484-196071593	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
8	nsv1006165	chr3:195383130-195777211	Bivalent Enhancer Weak transcription Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	36 gene(s)	inside rSNPs	diseases
9	nsv471621	chr3:195417664-195795474	Flanking Active TSS Strong transcription Genic enhancers Weak transcription Bivalent Enhancer Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
10	esv2751988	chr3:195433543-195651349	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	27 gene(s)	inside rSNPs	diseases
11	esv2756651	chr3:195433543-195696720	Weak transcription Strong transcription Bivalent Enhancer Flanking Active TSS Enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
12	nsv432528	chr3:195433543-195696720	Enhancers Strong transcription ZNF genes & repeats Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
13	esv2754016	chr3:195433543-195753766	Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Enhancers ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	32 gene(s)	inside rSNPs	diseases
14	nsv822410	chr3:195438740-195725565	Flanking Active TSS Strong transcription Enhancers Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	30 gene(s)	inside rSNPs	diseases
15	nsv878162	chr3:195475989-195641908	Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
16	nsv878163	chr3:195477791-195641908	Bivalent Enhancer Flanking Active TSS Enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
17	nsv997893	chr3:195501392-195642192	Flanking Active TSS Enhancers Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	22 gene(s)	inside rSNPs	diseases
18	nsv1005193	chr3:195526571-195709662	Strong transcription Weak transcription Bivalent Enhancer Enhancers Active TSS Genic enhancers Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
19	nsv878167	chr3:195550366-195637439	Enhancers Active TSS Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
20	nsv878168	chr3:195553259-195644332	Transcr. at gene 5' and 3' Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
21	nsv1002591	chr3:195564086-195643229	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
22	nsv530397	chr3:195565159-195740416	Enhancers Strong transcription Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	25 gene(s)	inside rSNPs	diseases
23	nsv593056	chr3:195571024-195656731	Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	19 gene(s)	inside rSNPs	diseases
24	nsv1007235	chr3:195582468-195651911	Bivalent Enhancer Flanking Active TSS Enhancers Strong transcription Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
25	nsv1002629	chr3:195582468-195769275	Flanking Active TSS Weak transcription Enhancers Genic enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	23 gene(s)	inside rSNPs	diseases
26	esv1811906	chr3:195598137-195637469	Active TSS Genic enhancers Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	14 gene(s)	inside rSNPs	diseases
27	nsv1014602	chr3:195606770-195661538	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA	17 gene(s)	inside rSNPs	diseases
28	nsv829827	chr3:195608866-195760829	Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	21 gene(s)	inside rSNPs	diseases
29	nsv469518	chr3:195623722-195795474	Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Enhancers ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
30	nsv482784	chr3:195623722-195795474	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	25 gene(s)	inside rSNPs	diseases
31	nsv1011404	chr3:195627654-195656614	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
32	esv1797272	chr3:195628636-195636469	Flanking Active TSS Active TSS Enhancers Genic enhancers Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
33	esv1803975	chr3:195628636-195636469	Flanking Active TSS Weak transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
34	nsv593057	chr3:195633438-195636469	Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
35	nsv593058	chr3:195635257-195636667	Bivalent/Poised TSS Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

mRNA abundance (count:4)

SNP	Gene	Cis/trans	Tissue	Source
rs3747671	PDCD6	Cis_chr	lymphoblastoid	RTeQTL
rs3747671	LOC152217	cis	parietal	SCAN
rs3747671	PIGZ	cis	cerebellum	SCAN
rs3747671	KIAA0226	cis	cerebellum	SCAN

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195632400-195635400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
2	chr3:195632600-195637200	Active TSS	Pancreatic Islets	Pancreatic Islet
3	chr3:195632800-195635400	Flanking Active TSS	NHEK	skin
4	chr3:195632800-195635600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
5	chr3:195632800-195635600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr3:195632800-195635600	Flanking Active TSS	Duodenum Mucosa	Duodenum
7	chr3:195632800-195635800	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
8	chr3:195632800-195635800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr3:195633000-195635400	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
10	chr3:195633000-195635400	Flanking Active TSS	Primary T regulatory cells fromperipheralblood	blood
11	chr3:195633000-195635600	Flanking Active TSS	Liver	Liver
12	chr3:195633000-195636000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr3:195633000-195636000	Flanking Active TSS	Dnd41	blood
14	chr3:195633200-195635400	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
15	chr3:195633200-195635400	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
16	chr3:195633200-195635400	Flanking Active TSS	Primary B cells from peripheral blood	blood
17	chr3:195633200-195635400	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
18	chr3:195633200-195635400	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
19	chr3:195633200-195635400	Flanking Active TSS	Fetal Thymus	thymus
20	chr3:195633200-195635400	Flanking Active TSS	NHDF-Ad	bronchial
21	chr3:195633200-195635600	Flanking Active TSS	Primary T cells fromperipheralblood	blood
22	chr3:195633200-195635600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
23	chr3:195633200-195635600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
24	chr3:195633200-195635600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr3:195633200-195635600	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle
26	chr3:195633200-195635600	Flanking Active TSS	Osteobl	bone
27	chr3:195633200-195635800	Flanking Active TSS	Primary B cells from cord blood	blood
28	chr3:195633200-195635800	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
29	chr3:195633200-195636200	Flanking Active TSS	Primary hematopoietic stem cells	blood
30	chr3:195633400-195635600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
31	chr3:195633400-195635600	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
32	chr3:195633400-195635600	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
33	chr3:195633400-195635800	Enhancers	Fetal Brain Male	brain
34	chr3:195633400-195635800	Enhancers	Fetal Heart	heart
35	chr3:195633600-195635400	Flanking Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
36	chr3:195633600-195635400	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
37	chr3:195633600-195636000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
38	chr3:195633600-195636000	Flanking Active TSS	Adipose Nuclei	Adipose
39	chr3:195633600-195636000	Flanking Active TSS	Stomach Smooth Muscle	stomach
40	chr3:195633800-195635400	Flanking Active TSS	Brain Angular Gyrus	brain
41	chr3:195633800-195635400	Flanking Active TSS	Brain Anterior Caudate	brain
42	chr3:195633800-195635400	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
43	chr3:195633800-195635400	Flanking Active TSS	HSMMtube	muscle
44	chr3:195633800-195635600	Flanking Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
45	chr3:195633800-195635800	Flanking Active TSS	Placenta	Placenta
46	chr3:195634000-195635400	Flanking Active TSS	Primary T killer memory cells from peripheral blood	blood
47	chr3:195634000-195635400	Flanking Active TSS	GM12878-XiMat	blood
48	chr3:195634000-195635400	Flanking Active TSS	HSMM	muscle
49	chr3:195634000-195635600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
50	chr3:195634000-195635600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain

The 2.0 version of rSNPBase

Variant report

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