Variant report

Variant rs3748071
Chromosome Location chr6:143605429-143605430
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143570800-143609200 Weak transcription Fetal Intestine Large intestine
2 chr6:143583400-143606000 Weak transcription Fetal Intestine Small intestine
3 chr6:143583800-143615400 Weak transcription K562 blood
4 chr6:143589000-143607400 Weak transcription Aorta Aorta
5 chr6:143592200-143605600 Weak transcription Adipose Nuclei Adipose
6 chr6:143593200-143606800 Weak transcription NHEK skin
7 chr6:143593400-143607000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr6:143598600-143620200 Weak transcription Brain Angular Gyrus brain
9 chr6:143600600-143609200 Weak transcription Brain Anterior Caudate brain
10 chr6:143603000-143611000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr6:143603200-143605600 Weak transcription HMEC breast
12 chr6:143603200-143606200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr6:143603200-143607000 Weak transcription Fetal Heart heart
14 chr6:143603200-143609600 Weak transcription Brain Cingulate Gyrus brain
15 chr6:143603200-143616800 Weak transcription Brain Inferior Temporal Lobe brain
16 chr6:143603200-143622200 Weak transcription Brain Hippocampus Middle brain
17 chr6:143604000-143605800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:143604400-143605800 Enhancers Ovary ovary
19 chr6:143604600-143607800 Weak transcription Lung lung
20 chr6:143604800-143608000 Weak transcription Esophagus oesophagus
21 chr6:143604800-143608200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr6:143604800-143609200 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr6:143605000-143606400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr6:143605000-143608400 Enhancers Osteobl bone
25 chr6:143605200-143605800 Enhancers NH-A brain
26 chr6:143605200-143606600 Enhancers Colon Smooth Muscle Colon
27 chr6:143605200-143608600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr6:143605200-143608800 Enhancers Fetal Stomach stomach
29 chr6:143605200-143610400 Strong transcription Liver Liver
30 chr6:143605400-143605600 Strong transcription HepG2 liver
31 chr6:143605400-143605800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
32 chr6:143605400-143605800 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr6:143605400-143606400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
34 chr6:143605400-143606800 Enhancers Fetal Muscle Leg muscle
35 chr6:143605400-143607600 Enhancers Stomach Smooth Muscle stomach
36 chr6:143605400-143614600 Weak transcription NHDF-Ad bronchial

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