Variant report

Variant	rs374843462
Chromosome Location	chr12:41659828-41659829
allele	-/TAAAATCAA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv497867	chr12:41286305-41728650	Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv899034	chr12:41515090-41698342	Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS Weak transcription Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv899035	chr12:41548545-41710912	Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Weak transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv469364	chr12:41631105-41710912	Weak transcription Enhancers Active TSS Genic enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv558699	chr12:41631105-41710912	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv517338	chr12:41653979-41662453	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv3404398	chr12:41658910-41661458	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
8	esv3447263	chr12:41659135-41661133	Weak transcription Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv2648805	chr12:41659285-41660883	Weak transcription	n/a	n/a	inside rSNPs	n/a
10	esv3370873	chr12:41659585-41660633	Weak transcription	n/a	n/a	inside rSNPs	n/a
11	esv2204947	chr12:41659631-41660328	Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv5502	chr12:41659694-41660394	Weak transcription	n/a	n/a	inside rSNPs	n/a
13	esv3486252	chr12:41659703-41660218	Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3517753	chr12:41659723-41660243	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	esv3517749	chr12:41659733-41660224	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv3517750	chr12:41659743-41660189	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	esv3517747	chr12:41659745-41660170	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	esv3486274	chr12:41659755-41660207	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv3486286	chr12:41659757-41660204	Weak transcription	n/a	n/a	inside rSNPs	n/a
20	esv3486241	chr12:41659765-41660160	Weak transcription	n/a	n/a	inside rSNPs	n/a
21	esv3517746	chr12:41659766-41660191	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	esv3517751	chr12:41659782-41660182	Weak transcription	n/a	n/a	inside rSNPs	n/a
23	esv3426823	chr12:41659786-41660161	Weak transcription	n/a	n/a	inside rSNPs	n/a
24	esv3999	chr12:41659786-41660255	Weak transcription	n/a	n/a	inside rSNPs	n/a
25	esv3486263	chr12:41659801-41660141	Weak transcription	n/a	n/a	inside rSNPs	n/a
26	esv3517748	chr12:41659816-41660134	Weak transcription	n/a	n/a	inside rSNPs	n/a
27	nsv52593	chr12:41659817-41660133	Weak transcription	n/a	n/a	inside rSNPs	n/a
28	esv3486297	chr12:41659817-41660149	Weak transcription	n/a	n/a	inside rSNPs	n/a
29	esv3517754	chr12:41659817-41660149	Weak transcription	n/a	n/a	inside rSNPs	n/a
30	esv991188	chr12:41659824-41660140	Weak transcription	n/a	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:41651200-41661000	Weak transcription	Colon Smooth Muscle	Colon

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links