Variant report

Variant rs3748606
Chromosome Location chr1:151552372-151552373
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:151514400-151556800 Weak transcription Fetal Brain Male brain
2 chr1:151521800-151559000 Weak transcription Small Intestine intestine
3 chr1:151533000-151557200 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr1:151533800-151561600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr1:151535800-151561800 Weak transcription Brain Substantia Nigra brain
6 chr1:151537000-151556800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:151537400-151556000 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:151537400-151558400 Weak transcription Fetal Kidney kidney
9 chr1:151538000-151557400 Weak transcription Brain Hippocampus Middle brain
10 chr1:151539000-151556400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:151539000-151557000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr1:151539600-151555400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr1:151541000-151552600 Strong transcription Fetal Muscle Trunk muscle
14 chr1:151541000-151553200 Strong transcription Fetal Muscle Leg muscle
15 chr1:151541200-151557000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:151541400-151556400 Strong transcription Fetal Stomach stomach
17 chr1:151542000-151557000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
18 chr1:151542600-151557400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:151542800-151556600 Strong transcription Fetal Intestine Small intestine
20 chr1:151542800-151556600 Strong transcription Rectal Mucosa Donor 29 rectum
21 chr1:151543800-151556400 Strong transcription Fetal Intestine Large intestine
22 chr1:151545200-151555000 Strong transcription Sigmoid Colon Sigmoid Colon
23 chr1:151545200-151556600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr1:151545800-151553000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:151546400-151555200 Strong transcription Rectal Mucosa Donor 31 rectum
26 chr1:151546600-151552800 Strong transcription Colon Smooth Muscle Colon
27 chr1:151547400-151553200 Weak transcription Brain Angular Gyrus brain
28 chr1:151547400-151556000 Weak transcription Spleen Spleen
29 chr1:151547600-151556200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:151547600-151556200 Weak transcription HUVEC blood vessel
31 chr1:151548000-151552400 Strong transcription Duodenum Smooth Muscle Duodenum
32 chr1:151548000-151555000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr1:151548000-151556200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr1:151548000-151556800 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr1:151548000-151557200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:151548400-151557400 Weak transcription Brain Cingulate Gyrus brain
37 chr1:151548800-151557200 Strong transcription Brain Germinal Matrix brain
38 chr1:151548800-151558200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:151549000-151556200 Weak transcription Skeletal Muscle Female skeletal muscle
40 chr1:151549400-151552800 Genic enhancers NHEK skin
41 chr1:151550000-151553400 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr1:151550000-151554800 Weak transcription Primary T helper naive cells fromperipheralblood blood
43 chr1:151550000-151556400 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:151550200-151553600 Weak transcription iPS-15b Cell Line embryonic stem cell
45 chr1:151550200-151555000 Genic enhancers Placenta Placenta
46 chr1:151550200-151556600 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr1:151550400-151559800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
48 chr1:151550600-151554400 Strong transcription Fetal Brain Female brain
49 chr1:151550800-151554800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
50 chr1:151550800-151554800 Strong transcription Aorta Aorta

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