Variant report

Variant	rs375022389
Chromosome Location	chr14:69951671-69951672
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:69950456..69952040-chr14:70233397..70235258,2	MCF-7	breast:
2	chr14:69949714..69952374-chr14:70039182..70041131,3	MCF-7	breast:

Variant related genes	Relation type
ENSG00000100650	Chromatin interaction
ENSG00000267909	Chromatin interaction

Extended variants
information (count: 9 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3396933	chr14:69906914-70001258	Enhancers Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Weak transcription Strong transcription Bivalent Enhancer Active TSS Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	nsv1048882	chr14:69920881-69976694	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv1052107	chr14:69922552-69969297	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	nsv1039230	chr14:69922552-69972002	Strong transcription Enhancers Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
5	nsv1039192	chr14:69922552-69976694	Bivalent Enhancer Weak transcription Strong transcription Bivalent/Poised TSS Enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv456335	chr14:69928307-69971598	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Enhancers Bivalent/Poised TSS Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
7	nsv564967	chr14:69928307-69971598	Flanking Bivalent TSS/Enh Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
8	nsv1050258	chr14:69942127-69976694	Bivalent/Poised TSS Flanking Bivalent TSS/Enh Enhancers Bivalent Enhancer Flanking Active TSS Active TSS ZNF genes & repeats Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases
9	esv3357015	chr14:69950224-69952772	Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69949800-69952600	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
2	chr14:69950400-69951800	Bivalent/Poised TSS	HUES48 Cell Line	embryonic stem cell
3	chr14:69950400-69951800	Flanking Bivalent TSS/Enh	Cortex derived primary cultured neurospheres	brain
4	chr14:69950400-69951800	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr14:69950400-69951800	Bivalent/Poised TSS	Brain Angular Gyrus	brain
6	chr14:69950400-69951800	Bivalent Enhancer	Fetal Brain Male	brain
7	chr14:69950400-69952000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
8	chr14:69950400-69952000	Bivalent/Poised TSS	H9 Cell Line	embryonic stem cell
9	chr14:69950400-69952000	Bivalent/Poised TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
10	chr14:69950400-69952000	Bivalent/Poised TSS	HUES64 Cell Line	embryonic stem cell
11	chr14:69950400-69952000	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
12	chr14:69950400-69952000	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
13	chr14:69950400-69952000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr14:69950400-69952000	Flanking Bivalent TSS/Enh	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr14:69950400-69952000	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
16	chr14:69950400-69952200	Bivalent/Poised TSS	iPS-18 Cell Line	embryonic stem cell
17	chr14:69950400-69952200	Bivalent Enhancer	Spleen	Spleen
18	chr14:69950600-69951800	Bivalent/Poised TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr14:69950600-69951800	Enhancers	Primary B cells from cord blood	blood
20	chr14:69950600-69951800	Bivalent Enhancer	Primary B cells from peripheral blood	blood
21	chr14:69950600-69951800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr14:69950600-69951800	Flanking Bivalent TSS/Enh	Ganglion Eminence derived primary cultured neurospheres	brain
23	chr14:69950600-69951800	Flanking Bivalent TSS/Enh	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr14:69950600-69951800	Flanking Bivalent TSS/Enh	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr14:69950600-69951800	Flanking Bivalent TSS/Enh	Colonic Mucosa	Colon
26	chr14:69950600-69951800	Enhancers	Fetal Heart	heart
27	chr14:69950600-69952000	Bivalent/Poised TSS	ES-WA7 Cell Line	embryonic stem cell
28	chr14:69950600-69952000	Bivalent/Poised TSS	iPS DF 6.9 Cell Line	embryonic stem cell
29	chr14:69950600-69952000	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
30	chr14:69950600-69952000	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr14:69950600-69952000	Bivalent/Poised TSS	A549	lung
32	chr14:69950800-69951800	Bivalent/Poised TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr14:69950800-69951800	Bivalent/Poised TSS	ES-UCSF4 Cell Line	embryonic stem cell
34	chr14:69950800-69951800	Bivalent Enhancer	Fetal Lung	lung
35	chr14:69950800-69952000	Flanking Active TSS	Right Atrium	heart
36	chr14:69951000-69951800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
37	chr14:69951000-69951800	Bivalent Enhancer	Stomach Mucosa	stomach
38	chr14:69951000-69951800	Bivalent Enhancer	GM12878-XiMat	blood
39	chr14:69951000-69952000	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
40	chr14:69951000-69952000	Bivalent Enhancer	Liver	Liver
41	chr14:69951000-69952000	Bivalent/Poised TSS	HSMM	muscle
42	chr14:69951200-69951800	Bivalent Enhancer	Primary hematopoietic stem cells	blood
43	chr14:69951200-69951800	Bivalent Enhancer	Brain Anterior Caudate	brain
44	chr14:69951200-69951800	Bivalent Enhancer	Brain Substantia Nigra	brain
45	chr14:69951200-69951800	Bivalent/Poised TSS	HepG2	liver
46	chr14:69951200-69951800	Bivalent Enhancer	NHEK	skin
47	chr14:69951200-69952000	Bivalent/Poised TSS	Brain Dorsolateral Prefrontal Cortex	brain
48	chr14:69951200-69952000	Bivalent Enhancer	Fetal Stomach	stomach
49	chr14:69951200-69952000	Bivalent Enhancer	Sigmoid Colon	Sigmoid Colon
50	chr14:69951200-69952200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland

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