Variant report

Variant	rs375038115
Chromosome Location	chr14:79478821-79478822
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv917249	chr14:79388181-79574717	Enhancers Bivalent Enhancer Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv1041991	chr14:79394408-79644886	Active TSS Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
3	nsv1037112	chr14:79412455-79527656	Bivalent Enhancer Weak transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv931412	chr14:79420297-79928269	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	nsv1041198	chr14:79452019-79482977	Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
6	nsv1046464	chr14:79478352-79514789	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription	lncRNA	n/a	inside rSNPs	diseases
7	nsv1036542	chr14:79478352-79518230	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription	lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79477200-79479000	Enhancers	NHLF	lung
2	chr14:79477400-79483200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr14:79477400-79483200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
4	chr14:79477600-79483600	Weak transcription	NHDF-Ad	bronchial
5	chr14:79478200-79479200	Enhancers	HMEC	breast
6	chr14:79478200-79479200	Enhancers	HUVEC	blood vessel
7	chr14:79478200-79482400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr14:79478200-79482400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr14:79478200-79483000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr14:79478200-79485400	Weak transcription	Colon Smooth Muscle	Colon
11	chr14:79478400-79479000	Enhancers	Muscle Satellite Cultured Cells	--
12	chr14:79478400-79479000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr14:79478400-79479000	Enhancers	NHEK	skin
14	chr14:79478400-79479000	Enhancers	Osteobl	bone
15	chr14:79478400-79479200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr14:79478400-79479400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
17	chr14:79478400-79483000	Weak transcription	NH-A	brain
18	chr14:79478400-79485200	Weak transcription	Rectal Smooth Muscle	rectum

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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