Variant report

Variant	rs375322275
Chromosome Location	chr10:37625533-37625534
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1)
CpG islands
(count:61)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	STAT3	chr10:37625351-37625551	MCF10A-Er-Src	breast:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:37625532-37625582	A549	lung:	n/a
2	chr10:37625532-37625582	U87	brain:	n/a
3	chr10:37625532-37625582	CMK	blood:	n/a
4	chr10:37625532-37625582	AoSMC	blood vessel:	n/a
5	chr10:37625532-37625582	AG09319	gingival:	n/a
6	chr10:37625532-37625582	HNPCEpiC	eye:	n/a
7	chr10:37625532-37625582	HRCEpiC	kidney:	n/a
8	chr10:37625532-37625582	ECC-1	luminal epithelium:	n/a
9	chr10:37625532-37625582	AG09309	skin:	n/a
10	chr10:37625532-37625582	HCT-116	colon:	n/a
11	chr10:37625532-37625582	MCF10A-Er-Src	breast:	n/a
12	chr10:37625532-37625582	GM12892	blood:	n/a
13	chr10:37625532-37625582	AG10803	skin:	n/a
14	chr10:37625532-37625582	HPAEpiC	pulmonary alveolar:	n/a
15	chr10:37625532-37625582	SK-N-SH	brain:	n/a
16	chr10:37625532-37625582	NB4	blood:	n/a
17	chr10:37625532-37625582	LNCaP	prostate:	n/a
18	chr10:37625532-37625582	NHDF-neo	bronchial:	n/a
19	chr10:37625532-37625582	HAEpiC	amniotic membrane:	n/a
20	chr10:37625532-37625582	RPTEC	kidney:	n/a
21	chr10:37625532-37625582	NH-A	brain:	n/a
22	chr10:37625532-37625582	GM19239	blood:	n/a
23	chr10:37625532-37625582	HEEpiC	esophagus:	n/a
24	chr10:37625532-37625582	MCF-7	breast:	n/a
25	chr10:37625532-37625582	HepG2	liver:	n/a
26	chr10:37625532-37625582	Hepatocyte	liver:	n/a
27	chr10:37625532-37625582	HL-60	blood:	n/a
28	chr10:37625532-37625582	HCM	heart:	n/a
29	chr10:37625532-37625582	T-47D	breast:	n/a
30	chr10:37625532-37625582	ProgFib	skin:	n/a
31	chr10:37625532-37625582	SK-N-MC	brain:	n/a
32	chr10:37625532-37625582	HMEC	breast:	n/a
33	chr10:37625532-37625582	PANC-1	pancreas:	n/a
34	chr10:37625532-37625582	HUVEC	blood vessel:	n/a
35	chr10:37625532-37625582	IMR90	lung:	fetal
36	chr10:37625532-37625582	SKMC	muscle:	n/a
37	chr10:37625532-37625582	HIPEpiC	eye:	n/a
38	chr10:37625532-37625582	PFSK-1	brain:	n/a
39	chr10:37625532-37625582	GM12891	blood:	n/a
40	chr10:37625532-37625582	GM12878	blood:	n/a
41	chr10:37625532-37625582	GM06990	blood:	n/a
42	chr10:37625532-37625582	SAEC	small airway:	n/a
43	chr10:37625532-37625582	PrEC	prostate:	n/a
44	chr10:37625532-37625582	BE2_C	brain:	n/a
45	chr10:37625532-37625582	HCF	heart:	n/a
46	chr10:37625532-37625582	Hela-S3	cervix:	n/a
47	chr10:37625532-37625582	AG04450	lung:	fetal
48	chr10:37625532-37625582	HRPEpiC	eye:	n/a
49	chr10:37625532-37625582	ovcar-3	ovarian:	n/a
50	chr10:37625532-37625582	AG04449	skin:	fetal

No data

Variant related genes	Relation type
TMEM161BP1	TF binding region
TMEM161BP1	CpG island

Extended variants
information (count: 6 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758213	chr10:37285763-37625699	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
2	esv2759742	chr10:37285763-37625699	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
3	nsv1045454	chr10:37512369-37678936	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
4	esv2750892	chr10:37525594-37733381	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
5	nsv971877	chr10:37615294-37637158	Inactive region	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv3441992	chr10:37624992-37659509	ZNF genes & repeats	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
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