The 2.0 version of rSNPBase

Variant report

Variant rs375357
Chromosome Location chr2:40381989-40381990
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:40355400-40383800 Weak transcription Small Intestine intestine
2 chr2:40357800-40406400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr2:40358000-40392200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr2:40358200-40392200 Weak transcription NHLF lung
5 chr2:40358800-40389200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr2:40359000-40387400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr2:40364400-40383800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr2:40364600-40387000 Weak transcription Placenta Placenta
9 chr2:40365200-40396200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr2:40366600-40403000 Weak transcription Brain Germinal Matrix brain
11 chr2:40366800-40382800 Weak transcription Right Ventricle heart
12 chr2:40366800-40383000 Weak transcription Aorta Aorta
13 chr2:40366800-40387200 Weak transcription Muscle Satellite Cultured Cells --
14 chr2:40366800-40391800 Weak transcription Fetal Muscle Trunk muscle
15 chr2:40367000-40382800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr2:40367000-40384400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr2:40368600-40383000 Weak transcription Fetal Brain Female brain
18 chr2:40368600-40383800 Weak transcription Osteobl bone
19 chr2:40369200-40382800 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr2:40369600-40391600 Weak transcription Rectal Smooth Muscle rectum
21 chr2:40371800-40391800 Weak transcription NHDF-Ad bronchial
22 chr2:40374000-40384400 Weak transcription Fetal Stomach stomach
23 chr2:40375600-40384600 Weak transcription Fetal Muscle Leg muscle
24 chr2:40375600-40401800 Weak transcription HSMMtube muscle
25 chr2:40376200-40387000 Weak transcription Primary neutrophils fromperipheralblood blood
26 chr2:40376800-40394200 Strong transcription Monocytes-CD14+_RO01746 blood
27 chr2:40377600-40382600 Weak transcription Left Ventricle heart
28 chr2:40377600-40383000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:40377600-40383800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr2:40377600-40386200 Weak transcription Fetal Brain Male brain
31 chr2:40377800-40382800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:40377800-40383000 Weak transcription Stomach Smooth Muscle stomach
33 chr2:40378000-40391200 Weak transcription Brain Anterior Caudate brain
34 chr2:40378000-40391200 Weak transcription Fetal Thymus thymus
35 chr2:40378000-40399000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr2:40378200-40392000 Weak transcription Gastric stomach
37 chr2:40379200-40393400 Strong transcription Primary monocytes fromperipheralblood blood
38 chr2:40381000-40382600 Weak transcription Fetal Kidney kidney
39 chr2:40381000-40384800 Strong transcription Colon Smooth Muscle Colon
40 chr2:40381200-40382800 Weak transcription HSMM muscle
41 chr2:40381200-40391800 Weak transcription Adipose Nuclei Adipose
42 chr2:40381400-40382000 Enhancers Fetal Heart heart
43 chr2:40381400-40385600 Weak transcription Fetal Intestine Large intestine
44 chr2:40381400-40390200 Weak transcription Fetal Intestine Small intestine
45 chr2:40381600-40382400 Weak transcription Dnd41 blood
46 chr2:40381600-40398800 Weak transcription Brain Angular Gyrus brain
47 chr2:40381800-40395200 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015