Variant report

Variant	rs375367582
Chromosome Location	chr14:85707368-85707369
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:19)
CpG islands
(count:0)
Chromatin interactive
region (count:0)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:19 , 50 per page) page: 1

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	TEAD4	chr14:85707174-85707913	ECC-1	luminal epithelium:	n/a	n/a
2	NFIC	chr14:85707118-85708030	ECC-1	luminal epithelium:	n/a	n/a
3	EP300	chr14:85707358-85707666	SK-N-SH_RA	brain:	n/a	n/a
4	MAX	chr14:85707303-85707869	ECC-1	luminal epithelium:	n/a	n/a
5	TCF12	chr14:85707295-85707864	SK-N-SH	brain:	n/a	n/a
6	TCF12	chr14:85707204-85708037	ECC-1	luminal epithelium:	n/a	n/a
7	ESR1	chr14:85707363-85707744	ECC-1	luminal epithelium:	n/a	n/a
8	FOXM1	chr14:85707152-85708063	ECC-1	luminal epithelium:	n/a	n/a
9	EP300	chr14:85707178-85707888	ECC-1	luminal epithelium:	n/a	n/a
10	TCF12	chr14:85707185-85707992	ECC-1	luminal epithelium:	n/a	n/a
11	TEAD4	chr14:85707150-85708047	ECC-1	luminal epithelium:	n/a	n/a
12	ESR1	chr14:85707322-85707829	ECC-1	luminal epithelium:	n/a	n/a
13	MAX	chr14:85707273-85707715	ECC-1	luminal epithelium:	n/a	n/a
14	NR3C1	chr14:85707356-85707798	ECC-1	luminal epithelium:	n/a	n/a
15	EP300	chr14:85707171-85708121	ECC-1	luminal epithelium:	n/a	n/a
16	NR3C1	chr14:85707293-85707809	ECC-1	luminal epithelium:	n/a	n/a
17	FOXA1	chr14:85707311-85707661	ECC-1	luminal epithelium:	n/a	n/a
18	POLR2A	chr14:85707357-85707641	ECC-1	luminal epithelium:	n/a	n/a
19	NFIC	chr14:85707203-85708012	ECC-1	luminal epithelium:	n/a	n/a

No data

Variant related genes	Relation type
ENSG00000259044	TF binding region

Extended variants
information (count: 7 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3401331	chr14:85332747-85716351	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv832846	chr14:85517736-85715650	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
3	esv3381198	chr14:85690248-85709087	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region lncRNA	1 gene(s)	inside rSNPs	n/a
4	nsv902168	chr14:85693904-85716792	Active TSS Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	n/a
5	esv2422273	chr14:85703149-85767292	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv3414307	chr14:85705849-85708247	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	inside rSNPs	n/a
7	esv3437510	chr14:85706199-85707697	Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:85701200-85707400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr14:85701200-85715200	Weak transcription	HUES6 Cell Line	embryonic stem cell
3	chr14:85701600-85707400	Weak transcription	NHEK	skin
4	chr14:85705600-85707400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:85705600-85708000	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr14:85706000-85707400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr14:85706000-85707400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
8	chr14:85706200-85707400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr14:85706200-85707800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr14:85706200-85715600	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr14:85706400-85707400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr14:85707200-85707400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr14:85707200-85707400	Enhancers	Muscle Satellite Cultured Cells	--
14	chr14:85707200-85707400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr14:85707200-85707400	Enhancers	Colon Smooth Muscle	Colon
16	chr14:85707200-85707400	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr14:85707200-85707400	Flanking Active TSS	Osteobl	bone
18	chr14:85707200-85707600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr14:85707200-85707600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr14:85707200-85707600	Enhancers	Cortex derived primary cultured neurospheres	brain
21	chr14:85707200-85707600	Flanking Active TSS	Stomach Smooth Muscle	stomach
22	chr14:85707200-85707600	Enhancers	Hela-S3	cervix
23	chr14:85707200-85707800	Enhancers	HMEC	breast
24	chr14:85707200-85707800	Flanking Active TSS	HSMMtube	muscle
25	chr14:85707200-85708000	Flanking Active TSS	Fetal Kidney	kidney
26	chr14:85707200-85708000	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr14:85707200-85708000	Flanking Active TSS	HUVEC	blood vessel
28	chr14:85707200-85708000	Active TSS	NH-A	brain
29	chr14:85707200-85708200	Enhancers	Fetal Stomach	stomach
30	chr14:85707200-85708400	Active TSS	Ovary	ovary
31	chr14:85707200-85709200	Enhancers	HSMM	muscle
32	chr14:85707200-85710800	Enhancers	Fetal Brain Male	brain
33	chr14:85707200-85710800	Enhancers	Fetal Brain Female	brain

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