Variant report

Variant	rs375403332
Chromosome Location	chr5:94207059-94207060
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:94201284..94203096-chr5:94204647..94207071,2	K562	blood:
2	chr5:94205159..94207112-chr5:94208983..94211350,2	K562	blood:

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv823144	chr5:94172237-94212534	Enhancers Weak transcription Strong transcription Active TSS Flanking Active TSS Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv969235	chr5:94206105-94212142	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94163800-94209800	Weak transcription	Dnd41	blood
2	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr5:94181200-94209400	Weak transcription	GM12878-XiMat	blood
4	chr5:94186400-94208000	Weak transcription	Fetal Thymus	thymus
5	chr5:94191000-94232200	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr5:94194000-94209200	Strong transcription	Primary monocytes fromperipheralblood	blood
7	chr5:94200600-94208200	Weak transcription	Hela-S3	cervix
8	chr5:94200800-94236600	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr5:94202600-94211000	Weak transcription	Primary T cells from cord blood	blood
10	chr5:94203200-94208400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
11	chr5:94203400-94208000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr5:94204200-94207600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr5:94204400-94240600	Weak transcription	Lung	lung
14	chr5:94204800-94208400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr5:94205600-94207200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
16	chr5:94205600-94208600	Strong transcription	Primary neutrophils fromperipheralblood	blood
17	chr5:94206200-94207200	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr5:94206400-94207200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
19	chr5:94206400-94207200	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:94206800-94208800	Weak transcription	Adipose Nuclei	Adipose
21	chr5:94206800-94209000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
22	chr5:94206800-94211000	Weak transcription	HUES64 Cell Line	embryonic stem cell
23	chr5:94206800-94230000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr5:94207000-94208200	Weak transcription	HUES48 Cell Line	embryonic stem cell
25	chr5:94207000-94208600	Weak transcription	HUVEC	blood vessel
26	chr5:94207000-94210000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
27	chr5:94207000-94227000	Weak transcription	Primary hematopoietic stem cells	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links