The 2.0 version of rSNPBase

Variant report

Variant rs375640980
Chromosome Location chr10:97206743-97206744
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:97171000-97208000 Weak transcription HUES64 Cell Line embryonic stem cell
2 chr10:97190200-97207200 Weak transcription Colonic Mucosa Colon
3 chr10:97190800-97208200 Weak transcription H1 Cell Line embryonic stem cell
4 chr10:97193400-97210800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
5 chr10:97193800-97208000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr10:97197600-97207400 Weak transcription Brain Hippocampus Middle brain
7 chr10:97197600-97207600 Weak transcription Brain Germinal Matrix brain
8 chr10:97198400-97207600 Weak transcription Fetal Brain Female brain
9 chr10:97200200-97208800 Enhancers Colon Smooth Muscle Colon
10 chr10:97200800-97206800 Enhancers HepG2 liver
11 chr10:97201400-97207400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr10:97201600-97207400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr10:97202800-97209200 Enhancers Fetal Muscle Leg muscle
14 chr10:97203200-97208400 Enhancers Liver Liver
15 chr10:97203800-97209400 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr10:97204000-97208600 Enhancers Left Ventricle heart
17 chr10:97204600-97208200 Enhancers Cortex derived primary cultured neurospheres brain
18 chr10:97204600-97208200 Enhancers Placenta Placenta
19 chr10:97204600-97208200 Enhancers Lung lung
20 chr10:97204600-97208600 Enhancers Adipose Nuclei Adipose
21 chr10:97204600-97208600 Enhancers Fetal Stomach stomach
22 chr10:97204600-97208800 Enhancers Fetal Adrenal Gland Adrenal Gland
23 chr10:97204800-97207400 Enhancers Stomach Mucosa stomach
24 chr10:97204800-97208200 Enhancers Fetal Lung lung
25 chr10:97204800-97208600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr10:97204800-97209200 Enhancers Right Atrium heart
27 chr10:97204800-97209200 Enhancers Right Ventricle heart
28 chr10:97205000-97208200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr10:97205200-97211000 Weak transcription iPS-20b Cell Line embryonic stem cell
30 chr10:97205400-97206800 Weak transcription Fetal Kidney kidney
31 chr10:97205400-97206800 Weak transcription Fetal Muscle Trunk muscle
32 chr10:97205400-97208000 Weak transcription iPS-18 Cell Line embryonic stem cell
33 chr10:97205600-97207400 Weak transcription NHLF lung
34 chr10:97205600-97207800 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr10:97205600-97208200 Enhancers HUVEC blood vessel
36 chr10:97205600-97209000 Enhancers Skeletal Muscle Female skeletal muscle
37 chr10:97205600-97210200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr10:97205800-97207600 Weak transcription NH-A brain
39 chr10:97205800-97208200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr10:97206000-97207000 Weak transcription Esophagus oesophagus
41 chr10:97206000-97207400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr10:97206000-97207400 Weak transcription Brain Inferior Temporal Lobe brain
43 chr10:97206000-97207400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr10:97206000-97207600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr10:97206000-97207600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr10:97206000-97207600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr10:97206000-97207600 Weak transcription Brain Substantia Nigra brain
48 chr10:97206000-97207800 Weak transcription Duodenum Mucosa Duodenum
49 chr10:97206000-97207800 Weak transcription HSMMtube muscle
50 chr10:97206000-97208000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015