Variant report

Variant	rs375725471
Chromosome Location	chr8:130689534-130689535
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv891446	chr8:130656205-130710638	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3356972	chr8:130689470-130690518	Weak transcription Enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130682600-130694000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr8:130686000-130691200	Weak transcription	Fetal Lung	lung
3	chr8:130688200-130693800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr8:130688600-130689600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr8:130688600-130689600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr8:130688800-130691200	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr8:130689200-130690400	Weak transcription	Fetal Muscle Leg	muscle
8	chr8:130689200-130690800	Weak transcription	Primary monocytes fromperipheralblood	blood
9	chr8:130689200-130691000	Weak transcription	Skeletal Muscle Male	skeletal muscle
10	chr8:130689200-130694000	Weak transcription	Osteobl	bone
11	chr8:130689400-130689800	Weak transcription	Primary hematopoietic stem cells	blood
12	chr8:130689400-130689800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr8:130689400-130689800	Weak transcription	Dnd41	blood
14	chr8:130689400-130690000	Weak transcription	K562	blood
15	chr8:130689400-130690200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
16	chr8:130689400-130690800	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr8:130689400-130691000	Weak transcription	Skeletal Muscle Female	skeletal muscle
18	chr8:130689400-130691200	Weak transcription	Primary B cells from peripheral blood	blood
19	chr8:130689400-130697400	Weak transcription	HMEC	breast

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links