Variant report

Variant rs3757280
Chromosome Location chr6:44213460-44213461
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:44206200-44213600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr6:44212800-44213600 Enhancers Fetal Thymus thymus
3 chr6:44213000-44213600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr6:44213000-44213600 Flanking Active TSS HUES64 Cell Line embryonic stem cell
5 chr6:44213000-44214800 Active TSS Pancreatic Islets Pancreatic Islet
6 chr6:44213200-44213600 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
7 chr6:44213200-44213600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr6:44213200-44213600 Flanking Active TSS H9 Cell Line embryonic stem cell
9 chr6:44213200-44213600 Enhancers Primary monocytes fromperipheralblood blood
10 chr6:44213200-44213600 Enhancers Primary T cells fromperipheralblood blood
11 chr6:44213200-44213600 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr6:44213200-44213600 Flanking Active TSS Brain Angular Gyrus brain
13 chr6:44213200-44213600 Flanking Active TSS Brain Anterior Caudate brain
14 chr6:44213200-44213600 Flanking Active TSS Brain Cingulate Gyrus brain
15 chr6:44213200-44213600 Enhancers Fetal Muscle Leg muscle
16 chr6:44213200-44213600 Enhancers Rectal Mucosa Donor 31 rectum
17 chr6:44213200-44213800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
18 chr6:44213200-44213800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
19 chr6:44213200-44213800 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
20 chr6:44213200-44213800 Flanking Active TSS Brain Hippocampus Middle brain
21 chr6:44213200-44213800 Flanking Active TSS Brain Inferior Temporal Lobe brain
22 chr6:44213200-44213800 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
23 chr6:44213200-44213800 Flanking Active TSS Brain Substantia Nigra brain
24 chr6:44213200-44213800 Enhancers Gastric stomach
25 chr6:44213200-44213800 Flanking Active TSS A549 lung
26 chr6:44213200-44214000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr6:44213200-44214000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
28 chr6:44213200-44214000 Flanking Active TSS Adipose Nuclei Adipose
29 chr6:44213200-44214000 Enhancers Fetal Brain Male brain
30 chr6:44213200-44214000 Flanking Active TSS Skeletal Muscle Male skeletal muscle
31 chr6:44213200-44214000 Flanking Active TSS Skeletal Muscle Female skeletal muscle
32 chr6:44213200-44214600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr6:44213200-44214800 Flanking Active TSS Stomach Smooth Muscle stomach
34 chr6:44213200-44216000 Active TSS Colon Smooth Muscle Colon
35 chr6:44213200-44216000 Bivalent/Poised TSS HepG2 liver
36 chr6:44213400-44213600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr6:44213400-44213600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr6:44213400-44213600 Flanking Active TSS iPS-18 Cell Line embryonic stem cell
39 chr6:44213400-44213600 Flanking Active TSS iPS DF 19.11 Cell Line embryonic stem cell
40 chr6:44213400-44213600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr6:44213400-44213600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr6:44213400-44213600 Enhancers Primary neutrophils fromperipheralblood blood
43 chr6:44213400-44213600 Enhancers Primary B cells from cord blood blood
44 chr6:44213400-44213600 Enhancers Primary B cells from peripheral blood blood
45 chr6:44213400-44213600 Enhancers Primary hematopoietic stem cells short term culture blood
46 chr6:44213400-44213600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
47 chr6:44213400-44213600 Enhancers Primary T helper naive cells from peripheral blood blood
48 chr6:44213400-44213600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr6:44213400-44213600 Enhancers Primary Natural Killer cells fromperipheralblood blood
50 chr6:44213400-44213600 Enhancers Primary T killer naive cells fromperipheralblood blood

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