The 2.0 version of rSNPBase

Variant report

Variant rs3757334
Chromosome Location chr6:30123167-30123168
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30118600-30125000 Enhancers Fetal Intestine Large intestine
2 chr6:30119600-30124000 Weak transcription Right Atrium heart
3 chr6:30120600-30123800 Weak transcription K562 blood
4 chr6:30121000-30128200 Weak transcription Lung lung
5 chr6:30121600-30123600 Weak transcription Primary monocytes fromperipheralblood blood
6 chr6:30121600-30125600 Weak transcription Primary hematopoietic stem cells blood
7 chr6:30121800-30123600 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr6:30121800-30124000 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr6:30121800-30125000 Enhancers HMEC breast
10 chr6:30122000-30123600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr6:30122000-30123600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr6:30122000-30123800 Enhancers NH-A brain
13 chr6:30122000-30124800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:30122000-30124800 Enhancers A549 lung
15 chr6:30122000-30125000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr6:30122200-30123200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr6:30122200-30123200 Flanking Active TSS Hela-S3 cervix
18 chr6:30122200-30123400 Enhancers HSMMtube muscle
19 chr6:30122200-30124800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:30122200-30125000 Enhancers Liver Liver
21 chr6:30122200-30125000 Enhancers NHEK skin
22 chr6:30122200-30128200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
23 chr6:30122400-30123200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr6:30122400-30123200 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
25 chr6:30122400-30123200 Flanking Active TSS Rectal Mucosa Donor 31 rectum
26 chr6:30122400-30123200 Flanking Active TSS HepG2 liver
27 chr6:30122400-30123400 Enhancers HSMM muscle
28 chr6:30122400-30124400 Enhancers Muscle Satellite Cultured Cells --
29 chr6:30122400-30124400 Enhancers NHLF lung
30 chr6:30122400-30124600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr6:30122400-30125800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr6:30122600-30123800 Enhancers Colonic Mucosa Colon
33 chr6:30122600-30124200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:30122600-30124800 Enhancers HUVEC blood vessel
35 chr6:30122800-30124000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr6:30122800-30124000 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr6:30122800-30124800 Weak transcription Small Intestine intestine
38 chr6:30123000-30123200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
39 chr6:30123000-30124400 Enhancers Osteobl bone
40 chr6:30123000-30125000 Enhancers Duodenum Mucosa Duodenum
41 chr6:30123000-30125000 Enhancers Fetal Intestine Small intestine
42 chr6:30123000-30126200 Enhancers NHDF-Ad bronchial

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Last update: Aug 31, 2015