Variant report
| Variant | rs3759408 |
|---|---|
| Chromosome Location | chr12:48173221-48173222 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:48167600-48174000 | Enhancers | Spleen | Spleen |
| 2 | chr12:48168000-48173600 | Enhancers | Left Ventricle | heart |
| 3 | chr12:48168000-48173800 | Enhancers | Colon Smooth Muscle | Colon |
| 4 | chr12:48168000-48173800 | Enhancers | Esophagus | oesophagus |
| 5 | chr12:48168000-48174000 | Enhancers | Fetal Thymus | thymus |
| 6 | chr12:48168000-48174200 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr12:48168000-48174800 | Weak transcription | Fetal Intestine Large | intestine |
| 8 | chr12:48168000-48175000 | Weak transcription | NH-A | brain |
| 9 | chr12:48168000-48175400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 10 | chr12:48168000-48177200 | Weak transcription | Small Intestine | intestine |
| 11 | chr12:48168200-48173400 | Weak transcription | Fetal Intestine Small | intestine |
| 12 | chr12:48168200-48173600 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 13 | chr12:48168200-48173600 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
| 14 | chr12:48168200-48173600 | Enhancers | Adipose Nuclei | Adipose |
| 15 | chr12:48168200-48173600 | Enhancers | Fetal Muscle Leg | muscle |
| 16 | chr12:48168200-48174800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr12:48168200-48175600 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 18 | chr12:48168200-48195200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 19 | chr12:48168400-48174800 | Weak transcription | Primary T cells from cord blood | blood |
| 20 | chr12:48168600-48175600 | Weak transcription | Liver | Liver |
| 21 | chr12:48168600-48178200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 22 | chr12:48169000-48174200 | Genic enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 23 | chr12:48169000-48177600 | Weak transcription | Dnd41 | blood |
| 24 | chr12:48169200-48174000 | Enhancers | Primary Natural Killer cells fromperipheralblood | blood |
| 25 | chr12:48169200-48177600 | Weak transcription | Fetal Lung | lung |
| 26 | chr12:48169200-48178600 | Genic enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 27 | chr12:48169400-48173800 | Enhancers | Fetal Muscle Trunk | muscle |
| 28 | chr12:48169400-48174000 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 29 | chr12:48169400-48179200 | Weak transcription | Fetal Kidney | kidney |
| 30 | chr12:48169800-48181200 | Weak transcription | GM12878-XiMat | blood |
| 31 | chr12:48170000-48173600 | Enhancers | Gastric | stomach |
| 32 | chr12:48170000-48173600 | Enhancers | Rectal Smooth Muscle | rectum |
| 33 | chr12:48170200-48173800 | Enhancers | Brain Angular Gyrus | brain |
| 34 | chr12:48170400-48174600 | Weak transcription | Thymus | Thymus |
| 35 | chr12:48170400-48174800 | Weak transcription | Pancreas | Pancrea |
| 36 | chr12:48170600-48173400 | Enhancers | A549 | lung |
| 37 | chr12:48170600-48181200 | Weak transcription | HepG2 | liver |
| 38 | chr12:48171000-48173400 | Enhancers | H1 Cell Line | embryonic stem cell |
| 39 | chr12:48171000-48173600 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
| 40 | chr12:48171000-48173600 | Enhancers | Brain Germinal Matrix | brain |
| 41 | chr12:48171000-48173800 | Enhancers | Brain Dorsolateral Prefrontal Cortex | brain |
| 42 | chr12:48171400-48174200 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 43 | chr12:48171400-48175000 | Weak transcription | NHLF | lung |
| 44 | chr12:48171600-48173600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 45 | chr12:48171800-48173400 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 46 | chr12:48171800-48174200 | Weak transcription | NHEK | skin |
| 47 | chr12:48172000-48173600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 48 | chr12:48172000-48173800 | Enhancers | ES-WA7 Cell Line | embryonic stem cell |
| 49 | chr12:48172000-48174600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 50 | chr12:48172200-48173800 | Enhancers | Skeletal Muscle Female | skeletal muscle |
