| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1048381 |
chr11:105945117-106561574 |
Weak transcription Enhancers Active TSS Genic enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv898358 |
chr11:105999580-106182251 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
6 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv430428 |
chr11:106005901-106173046 |
Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
5 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv1036986 |
chr11:106046850-106075023 |
Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS
|
Chromatin interactive regionlncRNA
|
n/a
|
inside rSNPs
|
diseases
|
| 5 |
nsv826073 |
chr11:106064382-106122340 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved
Feedback
Last update: Aug 31, 2015