Variant report

Variant	rs376036621
Chromosome Location	chr8:11422773-11422774
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:11379820..11382247-chr8:11420170..11422972,2	MCF-7	breast:
2	chr8:11422187..11423813-chr8:11429710..11432078,2	MCF-7	breast:
3	chr8:11422237..11424811-chr8:11602615..11604781,2	MCF-7	breast:
4	chr8:11421781..11422781-chr8:11603539..11604516,9	K562	blood:
5	chr8:11421707..11422824-chr8:11816126..11817083,9	K562	blood:
6	chr8:11422289..11424857-chr8:11598109..11600598,2	MCF-7	breast:

Extended variants
information (count: 19 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1035072	chr8:10819444-11480692	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Bivalent/Poised TSS Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv539473	chr8:10819444-11480692	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv529399	chr8:10970091-11805960	Enhancers Strong transcription Weak transcription Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
4	esv34097	chr8:11177372-11489894	Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
5	nsv1017865	chr8:11377795-11579954	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
6	nsv520117	chr8:11391650-11429147	Enhancers Bivalent/Poised TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
7	nsv465466	chr8:11391650-11429147	Enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
8	nsv610289	chr8:11391650-11429147	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Strong transcription Genic enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
9	nsv465467	chr8:11391650-11430485	Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Genic enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
10	nsv610290	chr8:11391650-11430485	Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent Enhancer Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
11	esv2761407	chr8:11392880-11429147	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
12	nsv1029589	chr8:11392880-11429147	ZNF genes & repeats Bivalent/Poised TSS Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Strong transcription Flanking Bivalent TSS/Enh Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
13	nsv1026837	chr8:11394466-11464127	Bivalent Enhancer Weak transcription Enhancers Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
14	nsv1018959	chr8:11395232-11455756	Enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Active TSS Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
15	nsv890358	chr8:11396856-11448738	Enhancers Flanking Active TSS Bivalent Enhancer Weak transcription Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
16	nsv1033629	chr8:11401789-11466745	Enhancers Bivalent Enhancer Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
17	nsv523827	chr8:11408401-11486220	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
18	nsv1032195	chr8:11420541-11480692	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Genic enhancers Weak transcription ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
19	nsv1016749	chr8:11422571-11466745	Bivalent Enhancer Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Weak transcription ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:82 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:11421200-11422800	Bivalent/Poised TSS	iPS-20b Cell Line	embryonic stem cell
2	chr8:11421200-11422800	Flanking Bivalent TSS/Enh	Primary hematopoietic stem cells G-CSF-mobilized Male	--
3	chr8:11421400-11422800	Bivalent Enhancer	Liver	Liver
4	chr8:11421400-11422800	Flanking Bivalent TSS/Enh	Duodenum Smooth Muscle	Duodenum
5	chr8:11421400-11423000	Bivalent Enhancer	Esophagus	oesophagus
6	chr8:11421400-11423000	Enhancers	Fetal Heart	heart
7	chr8:11421600-11422800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 1	blood
8	chr8:11421600-11422800	Bivalent Enhancer	Placenta	Placenta
9	chr8:11421600-11422800	Flanking Bivalent TSS/Enh	Stomach Smooth Muscle	stomach
10	chr8:11421800-11422800	Bivalent Enhancer	Primary T helper memory cells from peripheral blood 2	blood
11	chr8:11421800-11422800	Flanking Bivalent TSS/Enh	Skeletal Muscle Male	skeletal muscle
12	chr8:11421800-11422800	Active TSS	A549	lung
13	chr8:11421800-11423000	Bivalent Enhancer	Primary monocytes fromperipheralblood	blood
14	chr8:11421800-11423000	Bivalent Enhancer	Stomach Mucosa	stomach
15	chr8:11422000-11422800	Flanking Bivalent TSS/Enh	Skeletal Muscle Female	skeletal muscle
16	chr8:11422200-11422800	Bivalent Enhancer	Cortex derived primary cultured neurospheres	brain
17	chr8:11422200-11422800	Bivalent Enhancer	Fetal Kidney	kidney
18	chr8:11422200-11423000	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
19	chr8:11422200-11423000	Enhancers	Gastric	stomach
20	chr8:11422200-11423000	Enhancers	Left Ventricle	heart
21	chr8:11422200-11423000	Bivalent Enhancer	Rectal Mucosa Donor 29	rectum
22	chr8:11422200-11423000	Bivalent Enhancer	Rectal Mucosa Donor 31	rectum
23	chr8:11422200-11423200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
24	chr8:11422200-11423200	Enhancers	Right Ventricle	heart
25	chr8:11422200-11423200	Enhancers	GM12878-XiMat	blood
26	chr8:11422200-11423400	Bivalent Enhancer	Fetal Thymus	thymus
27	chr8:11422200-11423800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr8:11422200-11423800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr8:11422400-11422800	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
30	chr8:11422400-11422800	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
31	chr8:11422400-11422800	Bivalent Enhancer	Primary T helper 17 cells PMA-I stimulated	--
32	chr8:11422400-11422800	Bivalent Enhancer	Primary T helper cells fromperipheralblood	blood
33	chr8:11422400-11422800	Bivalent Enhancer	Primary mononuclear cells fromperipheralblood	Blood
34	chr8:11422400-11422800	Flanking Bivalent TSS/Enh	Brain Dorsolateral Prefrontal Cortex	brain
35	chr8:11422400-11422800	Enhancers	Pancreas	Pancrea
36	chr8:11422400-11422800	Flanking Active TSS	Hela-S3	cervix
37	chr8:11422400-11422800	Enhancers	HUVEC	blood vessel
38	chr8:11422400-11423000	Flanking Bivalent TSS/Enh	HepG2	liver
39	chr8:11422400-11423400	Enhancers	Primary B cells from cord blood	blood
40	chr8:11422400-11424600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
41	chr8:11422600-11422800	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
42	chr8:11422600-11422800	Flanking Bivalent TSS/Enh	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr8:11422600-11422800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
44	chr8:11422600-11422800	Bivalent Enhancer	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
45	chr8:11422600-11422800	Flanking Bivalent TSS/Enh	Breast Myoepithelial Primary Cells	Breast
46	chr8:11422600-11422800	Bivalent Enhancer	Primary hematopoietic stem cells	blood
47	chr8:11422600-11422800	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
48	chr8:11422600-11422800	Bivalent Enhancer	Primary T killer memory cells from peripheral blood	blood
49	chr8:11422600-11422800	Bivalent Enhancer	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
50	chr8:11422600-11422800	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin02	Skin

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