Variant report

Variant	rs376042675
Chromosome Location	chr7:79643889-79643890
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429785	chr7:79589749-80177049	Bivalent/Poised TSS Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv607676	chr7:79636682-79687844	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv818527	chr7:79636682-79687844	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv607677	chr7:79636682-79693050	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:79643200-79644000	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
2	chr7:79643400-79644000	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr7:79643400-79644000	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
4	chr7:79643400-79644400	Enhancers	HUES64 Cell Line	embryonic stem cell
5	chr7:79643400-79644600	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr7:79643600-79644000	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr7:79643600-79644400	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr7:79643800-79644000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr7:79643800-79644000	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
10	chr7:79643800-79644000	ZNF genes & repeats	Dnd41	blood
11	chr7:79643800-79644200	Enhancers	Osteobl	bone
12	chr7:79643800-79644400	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
13	chr7:79643800-79644400	Enhancers	Muscle Satellite Cultured Cells	--
14	chr7:79643800-79644600	Enhancers	HUES48 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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