Variant report

Variant	rs376266127
Chromosome Location	chr8:86264814-86264815
allele	-/CCCCC
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr8:86264804-86264900	MCF-7	breast:	n/a	n/a

Variant related genes	Relation type
CA1	TF binding region

Extended variants
information (count: 8 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1018483	chr8:86142258-86547831	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv1024759	chr8:86162507-86361533	Weak transcription Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
3	nsv539659	chr8:86162507-86361533	Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
4	nsv971674	chr8:86187966-86338484	Weak transcription Enhancers Active TSS Strong transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	14 gene(s)	inside rSNPs	diseases
5	nsv1022463	chr8:86257031-86547831	Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
6	esv1804888	chr8:86263098-86986703	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	26 gene(s)	inside rSNPs	diseases
7	nsv831377	chr8:86263107-86444141	Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
8	nsv972109	chr8:86264488-86265285	Enhancers Weak transcription Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:86261600-86265400	Enhancers	Fetal Lung	lung
2	chr8:86261800-86265200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:86261800-86265400	Enhancers	Adipose Nuclei	Adipose
4	chr8:86262000-86266800	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr8:86262400-86265400	Enhancers	Fetal Muscle Leg	muscle
6	chr8:86262600-86267400	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr8:86263200-86265000	Enhancers	Left Ventricle	heart
8	chr8:86263600-86265200	Enhancers	Fetal Intestine Large	intestine
9	chr8:86263800-86265400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
10	chr8:86264200-86265000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr8:86264200-86265400	Enhancers	Fetal Intestine Small	intestine
12	chr8:86264200-86265400	Enhancers	Psoas Muscle	Psoas
13	chr8:86264200-86265400	Enhancers	Right Atrium	heart
14	chr8:86264200-86265600	Enhancers	NHEK	skin
15	chr8:86264400-86265400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr8:86264400-86265400	Enhancers	Rectal Mucosa Donor 29	rectum
17	chr8:86264400-86265400	Enhancers	HMEC	breast
18	chr8:86264600-86265000	Enhancers	Fetal Muscle Trunk	muscle
19	chr8:86264600-86265000	Enhancers	Spleen	Spleen
20	chr8:86264600-86265400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
21	chr8:86264600-86265400	Enhancers	Esophagus	oesophagus
22	chr8:86264600-86265400	Enhancers	Ovary	ovary
23	chr8:86264600-86265400	Enhancers	Rectal Mucosa Donor 31	rectum
24	chr8:86264600-86265400	Enhancers	Skeletal Muscle Female	skeletal muscle
25	chr8:86264800-86265200	Enhancers	Skeletal Muscle Male	skeletal muscle
26	chr8:86264800-86266800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
27	chr8:86264800-86266800	Weak transcription	Duodenum Mucosa	Duodenum
28	chr8:86264800-86267000	Weak transcription	Sigmoid Colon	Sigmoid Colon

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