| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
esv33638 |
chr2:54765256-55109455 |
Enhancers Weak transcription Genic enhancers Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
29 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv1005449 |
chr2:54938633-55129503 |
Flanking Active TSS Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
13 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
esv1844855 |
chr2:54987215-55012202 |
Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 4 |
esv1844727 |
chr2:54999712-55084583 |
Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
3 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv870295 |
chr2:55008613-55065985 |
Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS
|
Chromatin interactive regionlncRNA
|
2 gene(s)
|
inside rSNPs
|
diseases
|
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Last update: Aug 31, 2015