| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv1017581 |
chr9:2494815-3172020 |
Enhancers Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
27 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv539934 |
chr9:2494815-3172020 |
Strong transcription Weak transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
27 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv892085 |
chr9:2937654-3215842 |
Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Enhancers Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv831494 |
chr9:3007268-3172056 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats
|
TF binding regionChromatin interactive regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 5 |
nsv892086 |
chr9:3012276-3410838 |
Bivalent Enhancer ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
7 gene(s)
|
inside rSNPs
|
diseases
|
| 6 |
nsv892087 |
chr9:3014702-3153178 |
Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionChromatin interactive region
|
1 gene(s)
|
inside rSNPs
|
diseases
|
| 7 |
nsv1017474 |
chr9:3019068-3247215 |
Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 8 |
nsv892088 |
chr9:3019383-3215842 |
Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNA
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 9 |
nsv1015601 |
chr9:3095312-3150287 |
Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription ZNF genes & repeats Active TSS
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
| 10 |
nsv1024242 |
chr9:3112966-3156620 |
Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS ZNF genes & repeats
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 11 |
nsv1028668 |
chr9:3139007-3262791 |
Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 12 |
nsv539939 |
chr9:3139007-3262791 |
Bivalent Enhancer Strong transcription Bivalent/Poised TSS Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Genic enhancers
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
4 gene(s)
|
inside rSNPs
|
diseases
|
| 13 |
nsv1032921 |
chr9:3139007-3502815 |
Enhancers Flanking Active TSS Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 14 |
nsv539940 |
chr9:3139007-3502815 |
Strong transcription Weak transcription ZNF genes & repeats Enhancers Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandChromatin interactive regionlncRNAmiRNA target site
|
9 gene(s)
|
inside rSNPs
|
diseases
|
| 15 |
esv3347584 |
chr9:3141001-3169799 |
Weak transcription Enhancers Flanking Active TSS Active TSS
|
Chromatin interactive region
|
n/a
|
inside rSNPs
|
diseases
|
| 16 |
esv3343440 |
chr9:3148549-3148915 |
Enhancers
|
n/a
|
n/a
|
inside rSNPs
|
diseases
|
Variant overlapped rSNPs/rCNVs (count:16 , 50 per page) page:
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