Variant report

Variant	rs376330846
Chromosome Location	chr11:64073325-64073326
allele	-/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:64071691-64074716	K562	blood:	n/a	n/a
2	STAT5A	chr11:64073266-64074856	GM12878	blood:	n/a	chr11:64073713-64073725 chr11:64073718-64073730
3	TAF1	chr11:64073259-64073821	PFSK-1	brain:	n/a	n/a
4	MYC	chr11:64071789-64074118	K562	blood:	n/a	chr11:64072280-64072289 chr11:64073577-64073587 chr11:64073576-64073591 chr11:64072279-64072290 chr11:64072281-64072288 chr11:64073578-64073587 chr11:64072280-64072290 chr11:64073577-64073586 chr11:64073578-64073588 chr11:64073580-64073589 chr11:64072280-64072289
5	POLR2A	chr11:64071933-64073593	MCF10A-Er-Src	breast:	n/a	n/a
6	MYC	chr11:64072967-64073811	K562	blood:	n/a	chr11:64073577-64073587 chr11:64073576-64073591 chr11:64073578-64073587 chr11:64073577-64073586 chr11:64073578-64073588 chr11:64073580-64073589
7	POLR2A	chr11:64073265-64074220	GM12892	blood:	n/a	n/a
8	EGR1	chr11:64072516-64073908	K562	blood:	n/a	chr11:64072671-64072685 chr11:64073717-64073730 chr11:64072985-64072994 chr11:64073524-64073534 chr11:64072701-64072711 chr11:64072761-64072771 chr11:64072674-64072687 chr11:64073766-64073779 chr11:64073002-64073016 chr11:64072950-64072960 chr11:64072700-64072714 chr11:64072984-64072997
9	RAD21	chr11:64073299-64073823	H1-hESC	embryonic stem cell:	n/a	chr11:64073577-64073596 chr11:64073415-64073429
10	TCF12	chr11:64073238-64073940	ECC-1	luminal epithelium:	n/a	chr11:64073895-64073905
11	POLR2A	chr11:64072788-64074208	MCF-7	breast:	n/a	n/a
12	CEBPD	chr11:64073303-64073849	HepG2	liver:	n/a	n/a
13	POLR2A	chr11:64073230-64074783	K562	blood:	n/a	n/a
14	POLR2A	chr11:64073247-64074125	A549	lung:	n/a	n/a
15	EGR1	chr11:64072843-64073395	ECC-1	luminal epithelium:	n/a	chr11:64072985-64072994 chr11:64073002-64073016 chr11:64072950-64072960 chr11:64072984-64072997
16	POLR2A	chr11:64073252-64074132	HCT-116	colon:	n/a	n/a
17	YY1	chr11:64073267-64073650	GM12891	blood:	n/a	n/a
18	HCFC1	chr11:64071097-64074523	Hela-S3	cervix:	n/a	n/a
19	POLR2A	chr11:64071835-64073491	GM12878	blood:	n/a	n/a
20	POLR2A	chr11:64073309-64073449	Gliobla	brain:	n/a	n/a
21	POLR2A	chr11:64071638-64074206	GM12878	blood:	n/a	n/a
22	MAX	chr11:64073244-64074102	H1-hESC	embryonic stem cell:	n/a	chr11:64073577-64073587 chr11:64073576-64073591 chr11:64073578-64073587 chr11:64073577-64073586 chr11:64073578-64073588 chr11:64073580-64073589
23	HNF4G	chr11:64073249-64073855	HepG2	liver:	n/a	chr11:64073364-64073377 chr11:64073622-64073637 chr11:64073364-64073377 chr11:64073623-64073635 chr11:64073485-64073498 chr11:64073622-64073636 chr11:64073622-64073637 chr11:64073622-64073636 chr11:64073623-64073636 chr11:64073623-64073635 chr11:64073622-64073636 chr11:64073620-64073638 chr11:64073622-64073637 chr11:64073624-64073636 chr11:64073484-64073497 chr11:64073622-64073635 chr11:64073484-64073497 chr11:64073623-64073635 chr11:64073623-64073635
24	MAX	chr11:64071687-64074118	NB4	blood:	n/a	chr11:64072280-64072289 chr11:64073577-64073587 chr11:64073576-64073591 chr11:64072279-64072290 chr11:64072281-64072288 chr11:64073578-64073587 chr11:64072280-64072290 chr11:64073577-64073586 chr11:64073578-64073588 chr11:64073580-64073589 chr11:64072280-64072289
25	POLR2A	chr11:64071465-64075532	K562	blood:	n/a	n/a
26	POLR2A	chr11:64071808-64074002	NB4	blood:	n/a	n/a
27	POLR2A	chr11:64072888-64074295	GM12878	blood:	n/a	n/a
28	POLR2A	chr11:64073283-64074197	GM12891	blood:	n/a	n/a
29	HEY1	chr11:64073242-64074094	HepG2	liver:	n/a	chr11:64073895-64073910
30	TBP	chr11:64071807-64074043	HepG2	liver:	n/a	n/a
31	CTCF	chr11:64073243-64074330	SK-N-SH	brain:	n/a	chr11:64073576-64073594 chr11:64073833-64073841 chr11:64073577-64073593 chr11:64073579-64073592 chr11:64073790-64073803
32	POLR2A	chr11:64073248-64074365	ECC-1	luminal epithelium:	n/a	n/a
33	NR2F2	chr11:64073288-64074024	K562	blood:	n/a	chr11:64073624-64073639 chr11:64073620-64073635
34	POLR2A	chr11:64071734-64074195	GM18505	blood:	n/a	n/a
35	CTCF	chr11:64073251-64073906	K562	blood:	n/a	chr11:64073576-64073594 chr11:64073833-64073841 chr11:64073577-64073593 chr11:64073579-64073592 chr11:64073790-64073803
36	RXRA	chr11:64073220-64073920	HepG2	liver:	n/a	chr11:64073619-64073639 chr11:64073483-64073497 chr11:64073622-64073635 chr11:64073622-64073635 chr11:64073622-64073635 chr11:64073621-64073637 chr11:64073627-64073636 chr11:64073621-64073635 chr11:64073576-64073596
37	NR2F2	chr11:64073246-64074228	K562	blood:	n/a	chr11:64073624-64073639 chr11:64073620-64073635
38	REST	chr11:64073311-64073965	K562	blood:	n/a	chr11:64073524-64073537 chr11:64073521-64073534
39	SP1	chr11:64073260-64073831	HepG2	liver:	n/a	chr11:64073771-64073780 chr11:64073767-64073781 chr11:64073716-64073725 chr11:64073770-64073782 chr11:64073772-64073781 chr11:64073485-64073494 chr11:64073770-64073782
40	SP1	chr11:64073212-64074133	A549	lung:	n/a	chr11:64073771-64073780 chr11:64073767-64073781 chr11:64073716-64073725 chr11:64073770-64073782 chr11:64073772-64073781 chr11:64073848-64073862 chr11:64073485-64073494 chr11:64073770-64073782
41	POLR2A	chr11:64071834-64074012	GM10847	blood:	n/a	n/a
42	POLR2A	chr11:64073257-64074189	Hela-S3	cervix:	n/a	n/a
43	POLR2A	chr11:64072900-64075362	GM12878	blood:	n/a	n/a
44	MAX	chr11:64071575-64074336	A549	lung:	n/a	chr11:64072280-64072289 chr11:64073577-64073587 chr11:64073576-64073591 chr11:64072279-64072290 chr11:64072281-64072288 chr11:64073578-64073587 chr11:64072280-64072290 chr11:64073577-64073586 chr11:64073578-64073588 chr11:64073580-64073589 chr11:64072280-64072289
45	MAX	chr11:64071686-64074279	MCF-7	breast:	n/a	chr11:64072280-64072289 chr11:64073577-64073587 chr11:64073576-64073591 chr11:64072279-64072290 chr11:64072281-64072288 chr11:64073578-64073587 chr11:64072280-64072290 chr11:64073577-64073586 chr11:64073578-64073588 chr11:64073580-64073589 chr11:64072280-64072289
46	YY1	chr11:64072498-64074003	K562	blood:	n/a	chr11:64073058-64073067 chr11:64073184-64073198 chr11:64073055-64073069 chr11:64073060-64073069 chr11:64073052-64073066 chr11:64073775-64073789 chr11:64072949-64072963 chr11:64072951-64072960
47	POLR2A	chr11:64072564-64074110	ProgFib	skin:	n/a	n/a
48	MAX	chr11:64071743-64074075	K562	blood:	n/a	chr11:64072280-64072289 chr11:64073577-64073587 chr11:64073576-64073591 chr11:64072279-64072290 chr11:64072281-64072288 chr11:64073578-64073587 chr11:64072280-64072290 chr11:64073577-64073586 chr11:64073578-64073588 chr11:64073580-64073589 chr11:64072280-64072289
49	POLR2A	chr11:64071816-64074284	K562	blood:	n/a	n/a
50	POLR2A	chr11:64072355-64074117	MCF-7	breast:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr11:64072922..64075153-chr11:64420349..64423675,3	MCF-7	breast:
2	chr11:64072715..64075742-chr11:64108562..64111155,5	MCF-7	breast:
3	chr11:64072999..64073681-chr17:18907689..18908393,2	Hela-S3	cervix:
4	chr11:64068655..64075946-chr11:64105786..64111623,11	K562	blood:
5	chr11:64072964..64073671-chrX:119763784..119764639,2	Hela-S3	cervix:
6	chr11:64070986..64076286-chr11:64124810..64128616,7	K562	blood:
7	chr11:64033188..64045448-chr11:64059274..64075790,38	MCF-7	breast:
8	chr11:63997014..63999742-chr11:64070693..64073511,5	MCF-7	breast:
9	chr11:64073207..64075347-chr11:64577929..64579925,2	MCF-7	breast:
10	chr11:64073032..64073781-chr8:144373410..144373924,2	HCT-116	colon:
11	chr11:64003628..64022712-chr11:64064086..64078429,56	MCF-7	breast:
12	chr11:64072828..64073662-chr8:124084778..124085533,2	Hela-S3	cervix:
13	chr11:63990938..63995618-chr11:64068467..64075569,11	MCF-7	breast:
14	chr11:63932104..63935640-chr11:64072605..64074491,3	MCF-7	breast:
15	chr11:64072825..64073578-chr17:27716640..27717499,2	Hela-S3	cervix:
16	chr11:64071995..64074529-chr11:64215478..64217997,2	K562	blood:
17	chr11:64071691..64076218-chr11:64119080..64123328,5	MCF-7	breast:
18	chr1:149223959..149224602-chr11:64072832..64073816,2	Hela-S3	cervix:
19	chr11:64072878..64073549-chrX:14047651..14048574,2	Hela-S3	cervix:
20	chr11:64072491..64073482-chr19:39896853..39897736,2	Hela-S3	cervix:
21	chr11:63997990..64000103-chr11:64070945..64073334,3	MCF-7	breast:
22	chr11:64062581..64067286-chr11:64069885..64074549,10	MCF-7	breast:
23	chr11:64012813..64019826-chr11:64070484..64074683,9	MCF-7	breast:
24	chr11:64066836..64070235-chr11:64070747..64073935,5	MCF-7	breast:
25	chr11:64001731..64003390-chr11:64072435..64074262,2	MCF-7	breast:
26	chr11:63951617..63953554-chr11:64071921..64074266,2	MCF-7	breast:
27	chr11:64034991..64040375-chr11:64070988..64074526,14	MCF-7	breast:
28	chr11:63752274..63755193-chr11:64072992..64074621,2	MCF-7	breast:
29	chr11:63950774..63958537-chr11:64070493..64074690,13	MCF-7	breast:
30	chr11:64005251..64012775-chr11:64065543..64076594,19	MCF-7	breast:
31	chr11:64001770..64003427-chr11:64071826..64073538,2	MCF-7	breast:
32	chr11:64073223..64074022-chr12:56551543..56552410,2	Hela-S3	cervix:
33	chr11:64072556..64073542-chr9:74525673..74526347,2	Hela-S3	cervix:

Variant related genes	Relation type
ESRRA	TF binding region
ENSG00000149761	Chromatin interaction
ENSG00000046647	Chromatin interaction
ENSG00000149743	Chromatin interaction
ENSG00000160551	Chromatin interaction
ENSG00000257086	Chromatin interaction
ENSG00000133895	Chromatin interaction
ENSG00000128016	Chromatin interaction
ENSG00000188522	Chromatin interaction
ENSG00000171155	Chromatin interaction
ENSG00000207024	Chromatin interaction
ENSG00000168071	Chromatin interaction
ENSG00000256116	Chromatin interaction
ENSG00000133315	Chromatin interaction
ENSG00000181908	Chromatin interaction
ENSG00000173457	Chromatin interaction
ENSG00000173264	Chromatin interaction
ENSG00000206737	Chromatin interaction
ENSG00000092841	Chromatin interaction
ENSG00000168439	Chromatin interaction
ENSG00000173486	Chromatin interaction
ENSG00000162302	Chromatin interaction
ENSG00000185730	Chromatin interaction
ENSG00000257809	Chromatin interaction
ENSG00000107362	Chromatin interaction
ENSG00000110076	Chromatin interaction
ENSG00000173511	Chromatin interaction
ENSG00000167770	Chromatin interaction
ENSG00000182450	Chromatin interaction
ENSG00000219435	Chromatin interaction
ENSG00000002330	Chromatin interaction
ENSG00000156787	Chromatin interaction
ENSG00000110011	Chromatin interaction
ENSG00000149782	Chromatin interaction
ENSG00000256940	Chromatin interaction

Extended variants
information (count: 28 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:28 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897631	chr11:63664882-64129722	Flanking Active TSS Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	254 gene(s)	inside rSNPs	diseases
2	esv1802079	chr11:63746066-64151373	Bivalent Enhancer Flanking Active TSS Weak transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	247 gene(s)	inside rSNPs	diseases
3	nsv897646	chr11:63754986-64150370	Strong transcription Weak transcription Bivalent Enhancer Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	245 gene(s)	inside rSNPs	diseases
4	nsv1035875	chr11:63800238-64132030	Weak transcription Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	234 gene(s)	inside rSNPs	diseases
5	nsv469961	chr11:63822940-64085967	Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	224 gene(s)	inside rSNPs	diseases
6	nsv897660	chr11:63860826-64125142	Weak transcription Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	231 gene(s)	inside rSNPs	diseases
7	nsv897661	chr11:63863405-64129722	Flanking Active TSS Enhancers Weak transcription Active TSS Bivalent/Poised TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	233 gene(s)	inside rSNPs	diseases
8	nsv897662	chr11:63889749-64150370	Flanking Active TSS Enhancers Weak transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	237 gene(s)	inside rSNPs	diseases
9	nsv897664	chr11:63919742-64150370	Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	237 gene(s)	inside rSNPs	diseases
10	nsv869944	chr11:63932152-64123062	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	227 gene(s)	inside rSNPs	diseases
11	nsv468593	chr11:63941734-64089874	Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
12	nsv555185	chr11:63941734-64089874	Weak transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
13	nsv555186	chr11:63949095-64097233	Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Enhancers Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	212 gene(s)	inside rSNPs	diseases
14	nsv897667	chr11:63964657-64078380	Enhancers Strong transcription Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	141 gene(s)	inside rSNPs	diseases
15	nsv897668	chr11:63964657-64085298	Weak transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	163 gene(s)	inside rSNPs	diseases
16	nsv897669	chr11:63964657-64089874	Genic enhancers Weak transcription Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
17	nsv897670	chr11:63964657-64097233	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
18	nsv897671	chr11:63964657-64150370	Active TSS Flanking Active TSS Genic enhancers Weak transcription Enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	179 gene(s)	inside rSNPs	diseases
19	nsv832186	chr11:63972260-64170059	Active TSS Genic enhancers Weak transcription Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	180 gene(s)	inside rSNPs	diseases
20	nsv897672	chr11:63979643-64082807	Enhancers Flanking Active TSS Genic enhancers Bivalent Enhancer Weak transcription Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	140 gene(s)	inside rSNPs	diseases
21	esv1802320	chr11:63987425-64154633	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	178 gene(s)	inside rSNPs	diseases
22	nsv897679	chr11:63994692-64150370	Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	169 gene(s)	inside rSNPs	diseases
23	nsv897682	chr11:63999529-64170500	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	164 gene(s)	inside rSNPs	diseases
24	nsv1043277	chr11:64002997-64132030	Bivalent/Poised TSS Enhancers Active TSS Flanking Active TSS Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	157 gene(s)	inside rSNPs	diseases
25	nsv897685	chr11:64048912-64150370	Strong transcription Bivalent Enhancer Weak transcription Flanking Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	102 gene(s)	inside rSNPs	diseases
26	nsv897687	chr11:64049021-64078380	Flanking Bivalent TSS/Enh Enhancers Active TSS Flanking Active TSS Weak transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	59 gene(s)	inside rSNPs	diseases
27	esv3343615	chr11:64071901-64074749	Flanking Active TSS Active TSS Genic enhancers Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region	53 gene(s)	inside rSNPs	n/a
28	esv3414055	chr11:64072226-64074424	Enhancers Flanking Active TSS Weak transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	52 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:127 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64071600-64073600	Active TSS	Fetal Lung	lung
2	chr11:64071800-64073800	Active TSS	iPS-20b Cell Line	embryonic stem cell
3	chr11:64071800-64073800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr11:64071800-64073800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr11:64071800-64073800	Active TSS	Esophagus	oesophagus
6	chr11:64071800-64074000	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr11:64071800-64074000	Active TSS	Primary T cells from cord blood	blood
8	chr11:64071800-64074000	Active TSS	Colon Smooth Muscle	Colon
9	chr11:64071800-64074000	Active TSS	Duodenum Smooth Muscle	Duodenum
10	chr11:64071800-64074000	Active TSS	Psoas Muscle	Psoas
11	chr11:64071800-64074000	Active TSS	HSMMtube	muscle
12	chr11:64071800-64074200	Active TSS	iPS-18 Cell Line	embryonic stem cell
13	chr11:64071800-64074400	Active TSS	H9 Cell Line	embryonic stem cell
14	chr11:64071800-64074400	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr11:64071800-64074400	Active TSS	Pancreatic Islets	Pancreatic Islet
16	chr11:64071800-64074800	Active TSS	HUES64 Cell Line	embryonic stem cell
17	chr11:64072000-64073600	Active TSS	Spleen	Spleen
18	chr11:64072000-64073800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr11:64072000-64073800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr11:64072000-64073800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr11:64072000-64073800	Active TSS	Brain Anterior Caudate	brain
22	chr11:64072000-64073800	Active TSS	Brain Inferior Temporal Lobe	brain
23	chr11:64072000-64073800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
24	chr11:64072000-64073800	Active TSS	Brain Substantia Nigra	brain
25	chr11:64072000-64073800	Active TSS	Lung	lung
26	chr11:64072000-64073800	Active TSS	Right Ventricle	heart
27	chr11:64072000-64074000	Active TSS	HUES6 Cell Line	embryonic stem cell
28	chr11:64072000-64074000	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
29	chr11:64072000-64074000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
30	chr11:64072000-64074000	Active TSS	Aorta	Aorta
31	chr11:64072000-64074000	Active TSS	Brain Cingulate Gyrus	brain
32	chr11:64072000-64074000	Active TSS	Gastric	stomach
33	chr11:64072000-64074000	Active TSS	Ovary	ovary
34	chr11:64072000-64074000	Active TSS	Rectal Smooth Muscle	rectum
35	chr11:64072000-64074000	Active TSS	Sigmoid Colon	Sigmoid Colon
36	chr11:64072000-64074000	Active TSS	Thymus	Thymus
37	chr11:64072000-64074000	Active TSS	NHDF-Ad	bronchial
38	chr11:64072000-64074200	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
39	chr11:64072000-64074200	Active TSS	A549	lung
40	chr11:64072000-64074400	Active TSS	iPS-15b Cell Line	embryonic stem cell
41	chr11:64072000-64074600	Active TSS	HUES48 Cell Line	embryonic stem cell
42	chr11:64072000-64074600	Active TSS	Fetal Kidney	kidney
43	chr11:64072200-64073600	Active TSS	Primary T helper cells PMA-I stimulated	--
44	chr11:64072200-64073600	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
45	chr11:64072200-64073800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
46	chr11:64072200-64073800	Active TSS	Muscle Satellite Cultured Cells	--
47	chr11:64072200-64073800	Active TSS	Duodenum Mucosa	Duodenum
48	chr11:64072200-64073800	Active TSS	Hela-S3	cervix
49	chr11:64072200-64074000	Active TSS	Primary T helper memory cells from peripheral blood 2	blood
50	chr11:64072200-64074000	Active TSS	Left Ventricle	heart

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links