Variant report

Variant	rs376387622
Chromosome Location	chr5:146845210-146845211
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5055	chr5:146812672-146857424	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv992285	chr5:146843809-146854803	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:146835800-146858800	Weak transcription	NH-A	brain
2	chr5:146836000-146845400	Weak transcription	Colon Smooth Muscle	Colon
3	chr5:146836200-146846200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr5:146836200-146846200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr5:146836200-146851600	Weak transcription	Fetal Stomach	stomach
6	chr5:146838400-146846000	Weak transcription	Left Ventricle	heart
7	chr5:146839600-146851600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr5:146839600-146852200	Weak transcription	Aorta	Aorta
9	chr5:146839800-146846000	Weak transcription	Rectal Smooth Muscle	rectum
10	chr5:146840000-146859200	Weak transcription	NHLF	lung
11	chr5:146840400-146845800	Weak transcription	Stomach Smooth Muscle	stomach
12	chr5:146840800-146846000	Weak transcription	Fetal Muscle Leg	muscle
13	chr5:146841200-146847200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
14	chr5:146841600-146845800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr5:146842600-146857600	Weak transcription	Osteobl	bone
16	chr5:146842800-146851600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr5:146843800-146852000	Weak transcription	Fetal Brain Male	brain
18	chr5:146844200-146845800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
19	chr5:146844200-146846000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr5:146844400-146845600	Weak transcription	HUES48 Cell Line	embryonic stem cell
21	chr5:146844400-146845800	Weak transcription	HUES64 Cell Line	embryonic stem cell
22	chr5:146844400-146845800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr5:146844400-146846000	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr5:146844400-146846000	Weak transcription	Right Atrium	heart
25	chr5:146844400-146846200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
26	chr5:146844400-146846200	Weak transcription	Brain Anterior Caudate	brain
27	chr5:146844400-146846200	Weak transcription	Stomach Mucosa	stomach
28	chr5:146844400-146847400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
29	chr5:146844400-146857800	Weak transcription	H9 Cell Line	embryonic stem cell
30	chr5:146844600-146846000	Weak transcription	H1 Cell Line	embryonic stem cell
31	chr5:146844600-146846000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr5:146845000-146845400	Enhancers	Fetal Muscle Trunk	muscle
33	chr5:146845200-146845400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr5:146845200-146845400	Enhancers	Brain Germinal Matrix	brain
35	chr5:146845200-146845400	Enhancers	Ovary	ovary
36	chr5:146845200-146846600	Enhancers	Adipose Nuclei	Adipose

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