Variant report

Variant	rs3763903
Chromosome Location	chr11:9075058-9075059
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:9011525..9013427-chr11:9074733..9076584,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs3763904	0.84[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3413845	chr11:8887279-9285127	Enhancers Transcr. at gene 5' and 3' Weak transcription Flanking Active TSS Strong transcription Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
2	nsv896984	chr11:8988550-9090408	Bivalent Enhancer Bivalent/Poised TSS Enhancers Flanking Bivalent TSS/Enh Weak transcription Strong transcription Flanking Active TSS Active TSS Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	esv33264	chr11:9007612-9311131	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	29 gene(s)	inside rSNPs	diseases
4	nsv896985	chr11:9013002-9152463	Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
5	nsv467704	chr11:9059192-9125301	Weak transcription Enhancers Strong transcription Bivalent/Poised TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
6	nsv553454	chr11:9059192-9125301	Enhancers Weak transcription Bivalent/Poised TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:9058400-9099800	Weak transcription	Aorta	Aorta
2	chr11:9066000-9081800	Weak transcription	Small Intestine	intestine
3	chr11:9069000-9080400	Weak transcription	Fetal Intestine Large	intestine
4	chr11:9069000-9092400	Weak transcription	Fetal Intestine Small	intestine
5	chr11:9069200-9083800	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr11:9070200-9078600	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr11:9070200-9087400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:9070200-9097200	Weak transcription	Brain Cingulate Gyrus	brain
9	chr11:9070400-9075200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr11:9070400-9077600	Weak transcription	Adipose Nuclei	Adipose
11	chr11:9070400-9078000	Weak transcription	Gastric	stomach
12	chr11:9070400-9098400	Weak transcription	Colonic Mucosa	Colon
13	chr11:9070600-9077400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr11:9070600-9087800	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr11:9070600-9091600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr11:9071200-9076800	Weak transcription	Stomach Smooth Muscle	stomach
17	chr11:9071200-9077800	Weak transcription	Colon Smooth Muscle	Colon
18	chr11:9071200-9087200	Weak transcription	Fetal Brain Male	brain
19	chr11:9072200-9076800	Weak transcription	Fetal Lung	lung
20	chr11:9073200-9075200	Weak transcription	Placenta	Placenta
21	chr11:9073800-9075600	Genic enhancers	Fetal Muscle Leg	muscle
22	chr11:9073800-9076200	Enhancers	HSMMtube	muscle
23	chr11:9074000-9075200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr11:9074000-9075200	Strong transcription	Pancreas	Pancrea
25	chr11:9074000-9075800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr11:9074000-9076200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr11:9074000-9076200	Enhancers	HSMM	muscle
28	chr11:9074400-9075200	Genic enhancers	Fetal Muscle Trunk	muscle
29	chr11:9074400-9075400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
30	chr11:9074400-9075600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr11:9074400-9076200	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr11:9074600-9075200	Genic enhancers	Fetal Stomach	stomach
33	chr11:9074800-9080600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
34	chr11:9075000-9075600	Enhancers	NHDF-Ad	bronchial
35	chr11:9075000-9075800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
36	chr11:9075000-9076000	Enhancers	Muscle Satellite Cultured Cells	--
37	chr11:9075000-9081200	Weak transcription	Duodenum Mucosa	Duodenum
38	chr11:9075000-9088000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
39	chr11:9075000-9092600	Weak transcription	Rectal Mucosa Donor 29	rectum

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