The 2.0 version of rSNPBase

Variant report

Variant rs376565676
Chromosome Location chr6:13806149-13806150
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:13788000-13810600 Weak transcription Fetal Heart heart
2 chr6:13788000-13810800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:13788000-13812200 Weak transcription Aorta Aorta
4 chr6:13788000-13813200 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr6:13788000-13813400 Weak transcription Brain Germinal Matrix brain
6 chr6:13788200-13807600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr6:13788400-13810600 Weak transcription Colonic Mucosa Colon
8 chr6:13788600-13810800 Weak transcription Stomach Mucosa stomach
9 chr6:13788800-13810600 Weak transcription Small Intestine intestine
10 chr6:13788800-13812200 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr6:13788800-13813600 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr6:13792600-13810800 Weak transcription Spleen Spleen
13 chr6:13793000-13813200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr6:13794800-13812200 Weak transcription HMEC breast
15 chr6:13795200-13808200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr6:13795200-13810800 Weak transcription NHLF lung
17 chr6:13795400-13812200 Weak transcription HUVEC blood vessel
18 chr6:13796000-13809800 Strong transcription Dnd41 blood
19 chr6:13796000-13811000 Weak transcription Pancreatic Islets Pancreatic Islet
20 chr6:13796400-13807600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr6:13796800-13809800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:13797000-13807000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr6:13797000-13807400 Strong transcription Duodenum Mucosa Duodenum
24 chr6:13797000-13807600 Strong transcription Fetal Thymus thymus
25 chr6:13797000-13809800 Strong transcription HUES48 Cell Line embryonic stem cell
26 chr6:13797200-13806400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr6:13797600-13807400 Strong transcription Fetal Stomach stomach
28 chr6:13797600-13808200 Weak transcription HSMM muscle
29 chr6:13797600-13810600 Strong transcription Fetal Intestine Small intestine
30 chr6:13797800-13807400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr6:13798400-13807400 Strong transcription Fetal Intestine Large intestine
32 chr6:13798600-13807600 Strong transcription HUES64 Cell Line embryonic stem cell
33 chr6:13799000-13807600 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr6:13799000-13807600 Strong transcription Primary T helper cells fromperipheralblood blood
35 chr6:13799400-13806600 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr6:13799400-13807200 Strong transcription Placenta Placenta
37 chr6:13799800-13811400 Weak transcription Ovary ovary
38 chr6:13799800-13812000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr6:13800600-13807800 Strong transcription K562 blood
40 chr6:13800600-13813600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr6:13801400-13812200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr6:13801400-13813200 Weak transcription Primary T killer naive cells fromperipheralblood blood
43 chr6:13801600-13811000 Weak transcription Placenta Amnion Placenta Amnion
44 chr6:13801600-13813200 Weak transcription A549 lung
45 chr6:13801800-13812600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr6:13802000-13810800 Weak transcription Brain Substantia Nigra brain
47 chr6:13802000-13812200 Weak transcription Primary T helper naive cells from peripheral blood blood
48 chr6:13802200-13810600 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr6:13802200-13811000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
50 chr6:13802200-13811800 Weak transcription Fetal Brain Male brain

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Last update: Aug 31, 2015