Variant report

Variant	rs376671508
Chromosome Location	chr12:57161799-57161800
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040850	chr12:57055011-57679209	Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases
2	esv1794914	chr12:57119236-57195379	Active TSS Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	36 gene(s)	inside rSNPs	diseases
3	nsv826382	chr12:57151464-57208607	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases
4	esv3383626	chr12:57160685-57162633	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:57152200-57161800	Weak transcription	Pancreas	Pancrea
2	chr12:57155800-57166000	Weak transcription	Right Atrium	heart
3	chr12:57156400-57179400	Weak transcription	Spleen	Spleen
4	chr12:57157600-57163600	Weak transcription	Colon Smooth Muscle	Colon
5	chr12:57157800-57171000	Weak transcription	Stomach Smooth Muscle	stomach
6	chr12:57158400-57161800	Weak transcription	HepG2	liver
7	chr12:57158600-57179200	Weak transcription	HSMMtube	muscle
8	chr12:57159800-57164000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr12:57160000-57162600	Weak transcription	Esophagus	oesophagus
10	chr12:57160400-57163600	Weak transcription	H1 Cell Line	embryonic stem cell
11	chr12:57160400-57168400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr12:57160600-57163400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr12:57160600-57163600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr12:57160600-57163600	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr12:57160800-57164000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
16	chr12:57160800-57179400	Weak transcription	Lung	lung
17	chr12:57161000-57165200	Weak transcription	Primary monocytes fromperipheralblood	blood
18	chr12:57161000-57165400	Weak transcription	Monocytes-CD14+_RO01746	blood
19	chr12:57161200-57162000	Enhancers	Liver	Liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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