The 2.0 version of rSNPBase

Variant report

Variant rs376698992
Chromosome Location chr6:30155945-30155946
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30145000-30173800 Weak transcription Right Atrium heart
2 chr6:30148000-30173000 Weak transcription Fetal Heart heart
3 chr6:30149000-30156400 Weak transcription Primary T killer memory cells from peripheral blood blood
4 chr6:30149200-30157400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr6:30150000-30156400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:30150200-30156400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr6:30150200-30163400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr6:30150400-30157000 Weak transcription Fetal Kidney kidney
9 chr6:30150600-30179200 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr6:30150800-30156200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr6:30151600-30161400 Strong transcription Primary T cells from cord blood blood
12 chr6:30151800-30158200 Strong transcription Brain Cingulate Gyrus brain
13 chr6:30151800-30160400 Strong transcription Thymus Thymus
14 chr6:30151800-30160600 Strong transcription Fetal Intestine Small intestine
15 chr6:30151800-30170400 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr6:30152000-30157200 Strong transcription Primary hematopoietic stem cells blood
17 chr6:30152000-30159200 Strong transcription Brain Anterior Caudate brain
18 chr6:30152000-30160200 Strong transcription Fetal Brain Female brain
19 chr6:30152000-30160200 Strong transcription Sigmoid Colon Sigmoid Colon
20 chr6:30152000-30160400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
21 chr6:30152000-30160600 Strong transcription Fetal Muscle Leg muscle
22 chr6:30152000-30160800 Strong transcription Primary T helper cells PMA-I stimulated --
23 chr6:30152000-30166400 Strong transcription Liver Liver
24 chr6:30152000-30168000 Strong transcription Fetal Intestine Large intestine
25 chr6:30152000-30168200 Strong transcription Primary T cells fromperipheralblood blood
26 chr6:30152000-30168200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr6:30152000-30168200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr6:30152000-30169000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:30152000-30170600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr6:30152000-30172400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr6:30152200-30159200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr6:30152200-30159400 Strong transcription Brain Inferior Temporal Lobe brain
33 chr6:30152200-30159600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr6:30152200-30159800 Strong transcription Primary B cells from cord blood blood
35 chr6:30152200-30159800 Strong transcription Fetal Thymus thymus
36 chr6:30152200-30160200 Strong transcription Primary T helper naive cells fromperipheralblood blood
37 chr6:30152200-30160200 Strong transcription Fetal Muscle Trunk muscle
38 chr6:30152200-30160200 Strong transcription Stomach Smooth Muscle stomach
39 chr6:30152200-30160400 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr6:30152200-30160400 Strong transcription Fetal Stomach stomach
41 chr6:30152200-30160600 Strong transcription Brain Hippocampus Middle brain
42 chr6:30152200-30167800 Strong transcription Primary monocytes fromperipheralblood blood
43 chr6:30152200-30167800 Strong transcription Primary B cells from peripheral blood blood
44 chr6:30152200-30168000 Strong transcription Monocytes-CD14+_RO01746 blood
45 chr6:30152200-30168200 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr6:30152200-30168200 Strong transcription Duodenum Mucosa Duodenum
47 chr6:30152200-30168600 Strong transcription Primary T helper cells fromperipheralblood blood
48 chr6:30152200-30169000 Strong transcription Duodenum Smooth Muscle Duodenum
49 chr6:30152400-30159000 Strong transcription HSMMtube muscle
50 chr6:30152400-30160200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015