Variant report

Variant	rs376771595
Chromosome Location	chr7:22202839-22202840
allele	-/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3408383	chr7:22202277-22203207	Weak transcription Strong transcription Genic enhancers Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv606405	chr7:22202485-22235825	Enhancers Weak transcription Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Transcr. at gene 5' and 3' Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	esv2333221	chr7:22202554-22203060	Weak transcription Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	esv3524967	chr7:22202618-22202941	Weak transcription Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3524969	chr7:22202661-22202961	Weak transcription Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3524968	chr7:22202670-22202877	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv4118	chr7:22202670-22202955	Strong transcription Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3524970	chr7:22202674-22202890	Weak transcription Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3475765	chr7:22202686-22202881	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
10	esv3475763	chr7:22202718-22202844	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
11	esv3475766	chr7:22202732-22202875	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
12	esv3524971	chr7:22202732-22202875	Weak transcription Enhancers Strong transcription	n/a	n/a	inside rSNPs	diseases
13	esv1239094	chr7:22202766-22202874	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases
14	nsv365300	chr7:22202777-22202883	Weak transcription Strong transcription Enhancers	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:22159800-22214000	Weak transcription	Small Intestine	intestine
2	chr7:22176400-22203200	Weak transcription	Stomach Mucosa	stomach
3	chr7:22179600-22206600	Weak transcription	Fetal Stomach	stomach
4	chr7:22184600-22240600	Weak transcription	Colonic Mucosa	Colon
5	chr7:22187000-22204800	Weak transcription	Duodenum Smooth Muscle	Duodenum
6	chr7:22190000-22232800	Weak transcription	Aorta	Aorta
7	chr7:22192600-22208200	Strong transcription	Liver	Liver
8	chr7:22193600-22207800	Weak transcription	Placenta	Placenta
9	chr7:22193800-22232000	Weak transcription	Adipose Nuclei	Adipose
10	chr7:22194200-22223200	Weak transcription	H9 Cell Line	embryonic stem cell
11	chr7:22194400-22218200	Weak transcription	HUES64 Cell Line	embryonic stem cell
12	chr7:22194400-22219400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr7:22194400-22227200	Weak transcription	Sigmoid Colon	Sigmoid Colon
14	chr7:22194400-22232400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr7:22194600-22221200	Weak transcription	HUES48 Cell Line	embryonic stem cell
16	chr7:22195200-22204000	Strong transcription	Rectal Mucosa Donor 31	rectum
17	chr7:22196000-22204200	Strong transcription	Dnd41	blood
18	chr7:22196200-22213800	Weak transcription	GM12878-XiMat	blood
19	chr7:22196400-22213800	Weak transcription	Primary B cells from cord blood	blood
20	chr7:22196600-22213600	Weak transcription	HUVEC	blood vessel
21	chr7:22196600-22214000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
22	chr7:22196800-22216800	Weak transcription	Spleen	Spleen
23	chr7:22196800-22218000	Weak transcription	H1 Cell Line	embryonic stem cell
24	chr7:22197600-22206600	Weak transcription	Fetal Kidney	kidney
25	chr7:22197600-22213400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
26	chr7:22197600-22213400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
27	chr7:22197600-22213400	Weak transcription	Thymus	Thymus
28	chr7:22197800-22206000	Weak transcription	Duodenum Mucosa	Duodenum
29	chr7:22197800-22206200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
30	chr7:22198000-22212800	Weak transcription	NHEK	skin
31	chr7:22198000-22223600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
32	chr7:22198200-22208000	Weak transcription	Rectal Mucosa Donor 29	rectum
33	chr7:22198200-22212400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
34	chr7:22198400-22213400	Weak transcription	Esophagus	oesophagus
35	chr7:22199000-22205400	Weak transcription	Fetal Thymus	thymus
36	chr7:22199400-22204400	Weak transcription	HepG2	liver
37	chr7:22199400-22205800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr7:22199800-22219600	Weak transcription	Left Ventricle	heart
39	chr7:22200600-22205400	Weak transcription	Lung	lung
40	chr7:22200800-22205600	Weak transcription	Fetal Intestine Large	intestine
41	chr7:22201000-22204600	Enhancers	Brain Substantia Nigra	brain
42	chr7:22201000-22209200	Weak transcription	Fetal Intestine Small	intestine
43	chr7:22201200-22203600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
44	chr7:22201200-22205800	Weak transcription	Brain Inferior Temporal Lobe	brain
45	chr7:22201400-22207800	Weak transcription	Brain Hippocampus Middle	brain
46	chr7:22201600-22209600	Weak transcription	Brain Cingulate Gyrus	brain
47	chr7:22202400-22203400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr7:22202600-22203600	Weak transcription	Pancreas	Pancrea
49	chr7:22202600-22206000	Weak transcription	Brain Angular Gyrus	brain
50	chr7:22202600-22212600	Weak transcription	Brain Anterior Caudate	brain

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