The 2.0 version of rSNPBase

Variant report

Variant rs3767981
Chromosome Location chr1:94088420-94088421
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94057600-94106400 Weak transcription Primary B cells from cord blood blood
2 chr1:94077200-94099000 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr1:94079400-94088600 Enhancers Fetal Intestine Large intestine
4 chr1:94079600-94089400 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:94079800-94090000 Enhancers Stomach Mucosa stomach
6 chr1:94080000-94089200 Genic enhancers NHEK skin
7 chr1:94081200-94095000 Genic enhancers HSMM muscle
8 chr1:94083400-94091200 Weak transcription Aorta Aorta
9 chr1:94083400-94093800 Weak transcription Psoas Muscle Psoas
10 chr1:94083400-94108200 Weak transcription Esophagus oesophagus
11 chr1:94083600-94101600 Weak transcription Stomach Smooth Muscle stomach
12 chr1:94083800-94091200 Weak transcription Ovary ovary
13 chr1:94083800-94091400 Weak transcription Fetal Stomach stomach
14 chr1:94083800-94095000 Weak transcription ES-WA7 Cell Line embryonic stem cell
15 chr1:94084000-94089400 Genic enhancers HMEC breast
16 chr1:94084000-94089800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:94084000-94090800 Weak transcription Fetal Lung lung
18 chr1:94084000-94091000 Weak transcription Brain Hippocampus Middle brain
19 chr1:94084000-94091400 Weak transcription H1 Cell Line embryonic stem cell
20 chr1:94084200-94090000 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr1:94084200-94090800 Weak transcription Fetal Adrenal Gland Adrenal Gland
22 chr1:94084200-94091400 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr1:94084200-94101000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr1:94084400-94091400 Enhancers HepG2 liver
25 chr1:94084600-94091200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr1:94085200-94088600 Enhancers Gastric stomach
27 chr1:94085200-94091000 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr1:94085200-94091400 Weak transcription HUES48 Cell Line embryonic stem cell
29 chr1:94085200-94092200 Enhancers Placenta Placenta
30 chr1:94085400-94093600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:94085400-94107600 Weak transcription Primary B cells from peripheral blood blood
32 chr1:94085800-94089200 Genic enhancers Muscle Satellite Cultured Cells --
33 chr1:94085800-94090400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr1:94085800-94091800 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr1:94086200-94091600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr1:94086200-94092600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr1:94086400-94089000 Weak transcription HSMMtube muscle
38 chr1:94086800-94098000 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:94086800-94101200 Weak transcription Fetal Muscle Trunk muscle
40 chr1:94087000-94091200 Weak transcription Small Intestine intestine
41 chr1:94087200-94089600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:94087200-94091000 Weak transcription Adipose Nuclei Adipose
43 chr1:94087400-94092600 Genic enhancers Hela-S3 cervix
44 chr1:94087600-94088600 Enhancers Liver Liver
45 chr1:94087600-94090800 Enhancers HUVEC blood vessel
46 chr1:94087800-94088600 Active TSS Rectal Mucosa Donor 29 rectum
47 chr1:94087800-94089200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:94087800-94090200 Enhancers Sigmoid Colon Sigmoid Colon
49 chr1:94087800-94090400 Enhancers HUES6 Cell Line embryonic stem cell
50 chr1:94087800-94091600 Enhancers Brain Germinal Matrix brain

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Last update: Aug 31, 2015