Variant report

Variant	rs376975007
Chromosome Location	chr6:44837360-44837361
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 1 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv885861	chr6:44837356-45043618	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:44828400-44837800	Weak transcription	Primary T helper cells PMA-I stimulated	--
2	chr6:44833600-44849400	Weak transcription	Primary T helper cells fromperipheralblood	blood
3	chr6:44836000-44838000	Flanking Active TSS	GM12878-XiMat	blood
4	chr6:44836200-44837400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:44836200-44837400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr6:44836200-44837400	Enhancers	Fetal Intestine Large	intestine
7	chr6:44836400-44837400	Enhancers	Primary T killer naive cells fromperipheralblood	blood
8	chr6:44836600-44837800	Enhancers	Fetal Intestine Small	intestine
9	chr6:44836600-44838000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr6:44837000-44838000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr6:44837200-44838200	Enhancers	HepG2	liver

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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