Variant report

Variant	rs376977886
Chromosome Location	chr12:41028641-41028642
allele	-/ACAGGCAGTA
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv899033	chr12:40758652-41122288	Bivalent/Poised TSS Enhancers Strong transcription Flanking Active TSS Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv832378	chr12:40943111-41132305	Bivalent/Poised TSS Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Weak transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv511504	chr12:41026938-41029204	Flanking Active TSS Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
4	nsv512269	chr12:41027012-41029251	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv2655104	chr12:41027138-41029070	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv2035164	chr12:41027859-41029219	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv3486052	chr12:41027904-41029142	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv3486064	chr12:41027945-41029125	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv3486030	chr12:41027974-41029054	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	esv3486041	chr12:41028026-41029020	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	esv3486075	chr12:41028040-41029018	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
12	esv10952	chr12:41028057-41028974	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:41027400-41029200	Enhancers	A549	lung
2	chr12:41027800-41028800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
3	chr12:41028400-41028800	Enhancers	Aorta	Aorta
4	chr12:41028600-41029000	Enhancers	Gastric	stomach
5	chr12:41028600-41029200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
6	chr12:41028600-41029200	Enhancers	Fetal Kidney	kidney
7	chr12:41028600-41029400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
8	chr12:41028600-41029400	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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