Variant report

Variant rs3769864
Chromosome Location chr2:179443217-179443218
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179388800-179448800 Weak transcription Small Intestine intestine
2 chr2:179388800-179495800 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr2:179396000-179445400 Strong transcription Right Ventricle heart
4 chr2:179408000-179503000 Weak transcription Brain Inferior Temporal Lobe brain
5 chr2:179411000-179466000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr2:179414000-179443400 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr2:179414800-179471800 Weak transcription Brain Substantia Nigra brain
8 chr2:179418400-179450200 Strong transcription HSMMtube muscle
9 chr2:179424800-179445200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr2:179425800-179446800 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr2:179427800-179443800 Strong transcription Duodenum Smooth Muscle Duodenum
12 chr2:179428400-179443800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr2:179428400-179478600 Weak transcription Rectal Smooth Muscle rectum
14 chr2:179429400-179448400 Weak transcription Colon Smooth Muscle Colon
15 chr2:179430800-179480000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
16 chr2:179434800-179450000 Strong transcription Fetal Intestine Large intestine
17 chr2:179435200-179469800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
18 chr2:179435400-179450200 Strong transcription Primary T cells fromperipheralblood blood
19 chr2:179435600-179443800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
20 chr2:179436600-179444800 Strong transcription Pancreas Pancrea
21 chr2:179436600-179463400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr2:179437600-179461400 Strong transcription Primary B cells from cord blood blood
23 chr2:179437600-179478800 Weak transcription Esophagus oesophagus
24 chr2:179437800-179444200 Strong transcription Adipose Nuclei Adipose
25 chr2:179437800-179465600 Strong transcription Left Ventricle heart
26 chr2:179438000-179467600 Strong transcription Primary T regulatory cells fromperipheralblood blood
27 chr2:179438200-179455600 Weak transcription GM12878-XiMat blood
28 chr2:179438200-179467200 Strong transcription Fetal Muscle Trunk muscle
29 chr2:179438200-179474800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr2:179438400-179518200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr2:179439000-179444200 Strong transcription Lung lung
32 chr2:179439000-179445000 Strong transcription Primary B cells from peripheral blood blood
33 chr2:179439000-179445000 Strong transcription Primary T helper cells PMA-I stimulated --
34 chr2:179439200-179446200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:179439200-179452800 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr2:179439200-179452800 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr2:179439400-179443800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
38 chr2:179439400-179451800 Strong transcription Fetal Heart heart
39 chr2:179439600-179455400 Weak transcription Fetal Brain Male brain
40 chr2:179440200-179443800 Weak transcription NH-A brain
41 chr2:179440200-179444800 Strong transcription Fetal Thymus thymus
42 chr2:179440200-179474400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr2:179440400-179443600 Weak transcription Sigmoid Colon Sigmoid Colon
44 chr2:179440400-179444400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr2:179440400-179445600 Weak transcription Brain Germinal Matrix brain
46 chr2:179440400-179467600 Strong transcription Fetal Muscle Leg muscle
47 chr2:179440600-179449600 Weak transcription H9 Cell Line embryonic stem cell
48 chr2:179440600-179478800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
49 chr2:179440600-179494000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr2:179440600-179505200 Weak transcription iPS-15b Cell Line embryonic stem cell

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