Variant report

Variant	rs377004083
Chromosome Location	chr8:69067870-69067871
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:91347083..91349227-chr8:69066919..69069417,2	MCF-7	breast:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3331644	chr8:68806705-69189171	Weak transcription ZNF genes & repeats Flanking Active TSS Enhancers Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1028889	chr8:69026806-69308725	Weak transcription Enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv948687	chr8:69041121-69642540	Flanking Bivalent TSS/Enh Enhancers Weak transcription Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
4	esv1792589	chr8:69066748-69085741	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:23 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:69020000-69082600	Weak transcription	Fetal Stomach	stomach
2	chr8:69041000-69068400	Weak transcription	Lung	lung
3	chr8:69043600-69107000	Weak transcription	Brain Substantia Nigra	brain
4	chr8:69046600-69083200	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr8:69046800-69070800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr8:69047000-69070000	Weak transcription	HUES6 Cell Line	embryonic stem cell
7	chr8:69052600-69104600	Weak transcription	Brain Hippocampus Middle	brain
8	chr8:69055800-69070800	Weak transcription	Primary hematopoietic stem cells	blood
9	chr8:69061800-69074000	Weak transcription	Adipose Nuclei	Adipose
10	chr8:69063800-69068200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr8:69065200-69070000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr8:69065200-69074000	Weak transcription	Left Ventricle	heart
13	chr8:69065600-69070600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr8:69067000-69082600	Weak transcription	Brain Anterior Caudate	brain
15	chr8:69067200-69070600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr8:69067200-69070600	Weak transcription	HUVEC	blood vessel
17	chr8:69067200-69074800	Weak transcription	H9 Cell Line	embryonic stem cell
18	chr8:69067400-69068400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
19	chr8:69067400-69068800	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr8:69067400-69068800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
21	chr8:69067400-69070400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
22	chr8:69067800-69068000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr8:69067800-69069800	Weak transcription	HUES48 Cell Line	embryonic stem cell

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