| No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
| 1 |
nsv915569 |
chrY:20707618-21649354 |
Enhancers Weak transcription Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers
|
TF binding regionCpG islandlncRNAmiRNA target site
|
24 gene(s)
|
inside rSNPs
|
diseases
|
| 2 |
nsv497825 |
chrY:20826182-21640237 |
Enhancers Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandlncRNAmiRNA target site
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 3 |
nsv533955 |
chrY:20826207-21640200 |
Weak transcription Bivalent/Poised TSS Enhancers Transcr. at gene 5' and 3' Active TSS Strong transcription Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats
|
TF binding regionCpG islandlncRNAmiRNA target site
|
17 gene(s)
|
inside rSNPs
|
diseases
|
| 4 |
nsv869239 |
chrY:20936502-21591074 |
Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh
|
TF binding regionCpG islandlncRNAmiRNA target site
|
15 gene(s)
|
inside rSNPs
|
n/a
|
| 5 |
esv3423784 |
chrY:21032114-21034812 |
Weak transcription Enhancers
|
TF binding regionlncRNA
|
1 gene(s)
|
inside rSNPs
|
n/a
|
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Last update: Aug 31, 2015