Variant report

Variant	rs377099755
Chromosome Location	chr14:31442505-31442506
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv564169	chr14:30819087-31541494	Strong transcription Genic enhancers ZNF genes & repeats Enhancers Weak transcription Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv901581	chr14:30978745-31585289	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
3	nsv901586	chr14:31365884-31465241	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
4	nsv1231	chr14:31424602-31444721	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Active TSS	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	n/a
5	esv3411274	chr14:31442250-31460681	Weak transcription Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers	Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:74 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:31420200-31464400	Weak transcription	Stomach Smooth Muscle	stomach
2	chr14:31425600-31442800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr14:31425600-31443000	Weak transcription	HUVEC	blood vessel
4	chr14:31436000-31457400	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr14:31436200-31443000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
6	chr14:31436200-31443000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
7	chr14:31436200-31443000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr14:31436200-31447000	Weak transcription	Duodenum Smooth Muscle	Duodenum
9	chr14:31436200-31449200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr14:31436200-31457200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
11	chr14:31436400-31442600	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr14:31436400-31442800	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr14:31436400-31443800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr14:31436400-31444000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
15	chr14:31436400-31444000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
16	chr14:31436400-31444600	Weak transcription	Monocytes-CD14+_RO01746	blood
17	chr14:31436400-31455200	Weak transcription	Rectal Smooth Muscle	rectum
18	chr14:31436400-31457200	Weak transcription	HSMM	muscle
19	chr14:31436400-31457800	Weak transcription	NHEK	skin
20	chr14:31436800-31444200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr14:31437000-31451600	Weak transcription	Primary hematopoietic stem cells	blood
22	chr14:31437400-31443000	Weak transcription	HUES6 Cell Line	embryonic stem cell
23	chr14:31439000-31444400	Enhancers	HepG2	liver
24	chr14:31439000-31445800	Enhancers	Colon Smooth Muscle	Colon
25	chr14:31439600-31444600	Weak transcription	Primary B cells from peripheral blood	blood
26	chr14:31439800-31443400	Weak transcription	GM12878-XiMat	blood
27	chr14:31440000-31442800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
28	chr14:31440000-31457200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
29	chr14:31440200-31442800	Weak transcription	Brain Inferior Temporal Lobe	brain
30	chr14:31440200-31444000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
31	chr14:31440400-31442800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr14:31440400-31442800	Weak transcription	Cortex derived primary cultured neurospheres	brain
33	chr14:31440400-31444200	Weak transcription	Psoas Muscle	Psoas
34	chr14:31440400-31455200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr14:31440400-31462000	Weak transcription	Right Atrium	heart
36	chr14:31441000-31443000	Enhancers	Stomach Mucosa	stomach
37	chr14:31441000-31443200	Weak transcription	Brain Angular Gyrus	brain
38	chr14:31441000-31443200	Weak transcription	Brain Substantia Nigra	brain
39	chr14:31441000-31464800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
40	chr14:31441200-31457000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
41	chr14:31441200-31457400	Weak transcription	NH-A	brain
42	chr14:31441400-31443000	Enhancers	Small Intestine	intestine
43	chr14:31441600-31442800	Weak transcription	HUES64 Cell Line	embryonic stem cell
44	chr14:31441600-31442800	Weak transcription	Brain Anterior Caudate	brain
45	chr14:31441600-31442800	Weak transcription	A549	lung
46	chr14:31441600-31443000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
47	chr14:31441600-31445200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
48	chr14:31441600-31449800	Weak transcription	K562	blood
49	chr14:31441600-31464200	Weak transcription	HUES48 Cell Line	embryonic stem cell
50	chr14:31441800-31442600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood

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