The 2.0 version of rSNPBase

Variant report

Variant rs3772406
Chromosome Location chr3:47629793-47629794
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:47621000-47651600 Weak transcription Right Atrium heart
2 chr3:47621000-47653400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr3:47621200-47630600 Weak transcription Fetal Brain Male brain
4 chr3:47621600-47630600 Weak transcription Brain Angular Gyrus brain
5 chr3:47621800-47630600 Weak transcription Fetal Heart heart
6 chr3:47622200-47630000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr3:47622600-47653400 Weak transcription Stomach Mucosa stomach
8 chr3:47623000-47632600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
9 chr3:47623200-47632800 Strong transcription Brain Germinal Matrix brain
10 chr3:47623400-47630400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr3:47623400-47633000 Strong transcription Fetal Brain Female brain
12 chr3:47623400-47655000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr3:47623800-47630600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr3:47624000-47653200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
15 chr3:47624200-47636200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr3:47625000-47632600 Strong transcription HSMM muscle
17 chr3:47625000-47637200 Strong transcription Breast Myoepithelial Primary Cells Breast
18 chr3:47625400-47630600 Weak transcription Psoas Muscle Psoas
19 chr3:47625400-47632200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr3:47625400-47651400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr3:47625600-47633000 Strong transcription Fetal Muscle Leg muscle
22 chr3:47625600-47651200 Weak transcription ES-WA7 Cell Line embryonic stem cell
23 chr3:47625800-47632400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr3:47625800-47632600 Strong transcription Cortex derived primary cultured neurospheres brain
25 chr3:47626000-47634400 Strong transcription Primary T cells from cord blood blood
26 chr3:47626000-47641200 Strong transcription Fetal Thymus thymus
27 chr3:47626200-47632200 Strong transcription Fetal Stomach stomach
28 chr3:47626200-47632400 Strong transcription Fetal Intestine Small intestine
29 chr3:47626200-47632800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr3:47626200-47698600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr3:47626400-47632400 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr3:47626400-47632400 Strong transcription Fetal Muscle Trunk muscle
33 chr3:47626400-47632600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
34 chr3:47626400-47632800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr3:47626400-47632800 Strong transcription Primary hematopoietic stem cells blood
36 chr3:47626400-47632800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr3:47626400-47633000 Strong transcription Muscle Satellite Cultured Cells --
38 chr3:47626400-47636600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
39 chr3:47626400-47642600 Strong transcription Fetal Adrenal Gland Adrenal Gland
40 chr3:47626400-47655600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr3:47626400-47680600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr3:47626600-47631400 Strong transcription Rectal Mucosa Donor 31 rectum
43 chr3:47626600-47632200 Strong transcription GM12878-XiMat blood
44 chr3:47626600-47632400 Strong transcription Adipose Nuclei Adipose
45 chr3:47626600-47632400 Strong transcription Duodenum Smooth Muscle Duodenum
46 chr3:47626600-47633000 Strong transcription Primary T helper cells PMA-I stimulated --
47 chr3:47626600-47634400 Strong transcription Dnd41 blood
48 chr3:47626600-47635800 Strong transcription iPS-20b Cell Line embryonic stem cell
49 chr3:47626600-47636000 Strong transcription HUES48 Cell Line embryonic stem cell
50 chr3:47626600-47636600 Strong transcription K562 blood

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Last update: Aug 31, 2015