The 2.0 version of rSNPBase

Variant report

Variant rs377346098
Chromosome Location chr2:20971552-20971553
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20899800-20972400 Weak transcription Monocytes-CD14+_RO01746 blood
2 chr2:20902400-20971800 Weak transcription Primary T regulatory cells fromperipheralblood blood
3 chr2:20917600-20971800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr2:20926200-20977000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:20926400-20995000 Weak transcription Hela-S3 cervix
6 chr2:20937200-20974400 Weak transcription HSMM muscle
7 chr2:20946600-20972200 Weak transcription Esophagus oesophagus
8 chr2:20949200-20979200 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr2:20950600-20971600 Weak transcription Fetal Kidney kidney
10 chr2:20951000-20972400 Weak transcription Primary T helper cells PMA-I stimulated --
11 chr2:20951600-20973600 Weak transcription Brain Cingulate Gyrus brain
12 chr2:20951800-20993200 Weak transcription Colon Smooth Muscle Colon
13 chr2:20952800-20972200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr2:20952800-20972400 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr2:20952800-20974000 Weak transcription A549 lung
16 chr2:20952800-20990400 Weak transcription Rectal Smooth Muscle rectum
17 chr2:20953000-20972200 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr2:20953000-20989400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr2:20954200-21001200 Weak transcription NH-A brain
20 chr2:20957800-20973600 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr2:20957800-20988400 Weak transcription Left Ventricle heart
22 chr2:20957800-20988800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr2:20958400-20977600 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr2:20958600-20995800 Weak transcription HMEC breast
25 chr2:20959000-20995400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr2:20959200-20973600 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr2:20959200-20997000 Weak transcription Brain Substantia Nigra brain
28 chr2:20959800-20972800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr2:20960400-20977200 Weak transcription Stomach Mucosa stomach
30 chr2:20960600-20972200 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr2:20960600-20972200 Weak transcription Stomach Smooth Muscle stomach
32 chr2:20960600-20983600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr2:20960600-20989200 Weak transcription Brain Hippocampus Middle brain
34 chr2:20960800-20971800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr2:20960800-20972200 Weak transcription Liver Liver
36 chr2:20960800-20973000 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr2:20960800-20978200 Weak transcription NHEK skin
38 chr2:20960800-20989000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr2:20960800-20996200 Weak transcription HSMMtube muscle
40 chr2:20961000-20972000 Weak transcription Primary hematopoietic stem cells blood
41 chr2:20961200-20973600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr2:20961400-20971600 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr2:20961400-20972200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr2:20961400-20972800 Weak transcription K562 blood
45 chr2:20963400-20974000 Weak transcription iPS-18 Cell Line embryonic stem cell
46 chr2:20963400-20976600 Weak transcription H1 Cell Line embryonic stem cell
47 chr2:20964000-20981600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr2:20964000-20996000 Weak transcription Osteobl bone
49 chr2:20965400-20972400 Weak transcription Placenta Amnion Placenta Amnion
50 chr2:20965600-20982400 Weak transcription NHLF lung

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Last update: Aug 31, 2015