Variant report

Variant	rs377456298
Chromosome Location	chr5:93087585-93087586
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532196	chr5:92933949-93573527	Strong transcription Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
2	nsv830405	chr5:93086825-93258518	Enhancers Weak transcription Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:93040600-93088600	Weak transcription	Aorta	Aorta
2	chr5:93070000-93108200	Weak transcription	Thymus	Thymus
3	chr5:93070400-93108200	Weak transcription	Liver	Liver
4	chr5:93072800-93096000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
5	chr5:93073600-93091600	Weak transcription	Sigmoid Colon	Sigmoid Colon
6	chr5:93075400-93108400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
7	chr5:93075800-93108200	Weak transcription	Primary B cells from cord blood	blood
8	chr5:93076800-93108200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
9	chr5:93077000-93087600	Weak transcription	Pancreas	Pancrea
10	chr5:93077000-93090000	Weak transcription	Gastric	stomach
11	chr5:93077000-93091000	Weak transcription	Right Ventricle	heart
12	chr5:93077000-93108400	Weak transcription	Ovary	ovary
13	chr5:93077200-93087600	Weak transcription	Lung	lung
14	chr5:93077200-93091200	Weak transcription	Left Ventricle	heart
15	chr5:93077200-93093400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr5:93077200-93094200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
17	chr5:93077200-93095000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr5:93077200-93130400	Weak transcription	Spleen	Spleen
19	chr5:93077400-93093000	Weak transcription	Fetal Stomach	stomach
20	chr5:93077400-93095200	Weak transcription	Primary T cells from cord blood	blood
21	chr5:93077400-93111000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
22	chr5:93077600-93093600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr5:93079000-93090000	Weak transcription	Esophagus	oesophagus
24	chr5:93079000-93095200	Weak transcription	Primary B cells from peripheral blood	blood
25	chr5:93082800-93108400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
26	chr5:93085200-93095000	Weak transcription	Fetal Intestine Small	intestine
27	chr5:93087400-93087600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
28	chr5:93087400-93087800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr5:93087400-93088000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
30	chr5:93087400-93088000	Enhancers	Dnd41	blood

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