Variant report

Variant	rs377472972
Chromosome Location	chr3:80064469-80064470
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 24 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428088	chr3:79934080-80112721	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv590740	chr3:79999534-80575042	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv997786	chr3:80008898-80489031	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv536598	chr3:80008898-80489031	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv877030	chr3:80013063-80444843	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
6	nsv1014658	chr3:80035786-80716259	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
7	nsv536599	chr3:80035786-80716259	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
8	nsv997720	chr3:80035786-80745662	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
9	esv3409124	chr3:80060612-80066310	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
10	esv3461121	chr3:80060862-80066360	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
11	esv3461120	chr3:80061512-80065510	Weak transcription	n/a	n/a	inside rSNPs	n/a
12	esv3356118	chr3:80061612-80066110	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	n/a
13	esv3461122	chr3:80061787-80065510	Weak transcription	n/a	n/a	inside rSNPs	n/a
14	esv3461118	chr3:80061787-80065635	Weak transcription	n/a	n/a	inside rSNPs	n/a
15	nsv513054	chr3:80061803-80065254	Weak transcription	n/a	n/a	inside rSNPs	n/a
16	esv17166	chr3:80061822-80064536	Weak transcription	n/a	n/a	inside rSNPs	n/a
17	nsv821427	chr3:80061822-80064536	Weak transcription	n/a	n/a	inside rSNPs	n/a
18	nsv822151	chr3:80061822-80064536	Weak transcription	n/a	n/a	inside rSNPs	n/a
19	esv3464307	chr3:80062427-80064693	Weak transcription	n/a	n/a	inside rSNPs	n/a
20	esv3464308	chr3:80062427-80064693	Weak transcription	n/a	n/a	inside rSNPs	n/a
21	nsv822156	chr3:80062697-80064494	Weak transcription	n/a	n/a	inside rSNPs	n/a
22	esv1812593	chr3:80062959-80087047	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
23	esv1805561	chr3:80062959-80091406	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
24	esv1846559	chr3:80062959-80091406	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:80055200-80066600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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