Variant report

Variant rs3774750
Chromosome Location chr3:50208406-50208407
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:50194200-50208800 Weak transcription Pancreas Pancrea
2 chr3:50195400-50210200 Genic enhancers Fetal Stomach stomach
3 chr3:50195400-50210600 Enhancers Left Ventricle heart
4 chr3:50195400-50210800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr3:50196200-50211600 Enhancers Rectal Mucosa Donor 31 rectum
6 chr3:50197200-50211600 Genic enhancers Esophagus oesophagus
7 chr3:50199200-50209400 Enhancers Placenta Placenta
8 chr3:50200000-50209600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr3:50200000-50210400 Enhancers Fetal Brain Male brain
10 chr3:50200600-50211800 Enhancers Right Ventricle heart
11 chr3:50202000-50210600 Enhancers A549 lung
12 chr3:50202200-50210400 Enhancers Lung lung
13 chr3:50202400-50208800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:50202800-50211000 Enhancers Fetal Muscle Leg muscle
15 chr3:50203000-50210000 Enhancers Duodenum Mucosa Duodenum
16 chr3:50203400-50211400 Weak transcription Placenta Amnion Placenta Amnion
17 chr3:50203800-50210000 Genic enhancers HMEC breast
18 chr3:50204000-50208800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
19 chr3:50204400-50211000 Weak transcription H9 Cell Line embryonic stem cell
20 chr3:50204600-50209600 Enhancers HUVEC blood vessel
21 chr3:50204600-50226600 Weak transcription Brain Anterior Caudate brain
22 chr3:50204800-50208600 Weak transcription Psoas Muscle Psoas
23 chr3:50204800-50210400 Enhancers Stomach Smooth Muscle stomach
24 chr3:50204800-50210600 Genic enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr3:50204800-50211200 Weak transcription Aorta Aorta
26 chr3:50204800-50211800 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr3:50205000-50208600 Enhancers HepG2 liver
28 chr3:50205000-50209200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr3:50205000-50212800 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr3:50205200-50208800 Flanking Active TSS Hela-S3 cervix
31 chr3:50205400-50209200 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr3:50205400-50210200 Genic enhancers NHEK skin
33 chr3:50205400-50211800 Enhancers Stomach Mucosa stomach
34 chr3:50205400-50226600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr3:50205400-50226600 Weak transcription Rectal Smooth Muscle rectum
36 chr3:50205600-50208600 Bivalent Enhancer Fetal Muscle Trunk muscle
37 chr3:50205600-50211200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr3:50205600-50211400 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr3:50205800-50208800 Enhancers Right Atrium heart
40 chr3:50205800-50211800 Weak transcription Fetal Kidney kidney
41 chr3:50206200-50208600 Weak transcription Duodenum Smooth Muscle Duodenum
42 chr3:50206400-50208600 Genic enhancers Gastric stomach
43 chr3:50206400-50226600 Weak transcription NHLF lung
44 chr3:50206600-50209000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr3:50206600-50211200 Weak transcription Ovary ovary
46 chr3:50206600-50211600 Genic enhancers Breast Myoepithelial Primary Cells Breast
47 chr3:50207000-50208800 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
48 chr3:50207000-50209200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr3:50207200-50208800 Enhancers Osteobl bone
50 chr3:50207200-50209000 Weak transcription Small Intestine intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links