Variant report

Variant	rs377575581
Chromosome Location	chr11:102305663-102305664
allele	-/TT
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:14 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3514195	chr11:102118479-102348362	Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers ZNF genes & repeats Enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
2	esv3514197	chr11:102118479-102348362	ZNF genes & repeats Enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
3	nsv1035567	chr11:102264516-102431607	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	8 gene(s)	inside rSNPs	diseases
4	nsv898334	chr11:102272884-102353192	Weak transcription Flanking Active TSS Strong transcription Enhancers Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
5	esv3472086	chr11:102303456-102307576	ZNF genes & repeats Strong transcription Enhancers Weak transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
6	esv3472097	chr11:102303456-102307576	Weak transcription ZNF genes & repeats Enhancers Strong transcription Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv11325	chr11:102303536-102307481	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	nsv556143	chr11:102304381-102306750	Strong transcription Weak transcription ZNF genes & repeats Genic enhancers Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
9	nsv556144	chr11:102304381-102307343	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv556145	chr11:102304838-102306515	Genic enhancers Weak transcription ZNF genes & repeats Strong transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv556146	chr11:102304838-102307343	Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
12	nsv556147	chr11:102305065-102306950	Enhancers Strong transcription Weak transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv556148	chr11:102305304-102306950	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv556149	chr11:102305304-102307343	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:97 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:102284600-102308600	Weak transcription	Lung	lung
2	chr11:102291600-102307800	Weak transcription	K562	blood
3	chr11:102293000-102316000	Weak transcription	HUVEC	blood vessel
4	chr11:102295400-102307600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr11:102298200-102316000	Weak transcription	Fetal Lung	lung
6	chr11:102300400-102319800	Weak transcription	Fetal Kidney	kidney
7	chr11:102300800-102316600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
8	chr11:102300800-102320600	Weak transcription	Ovary	ovary
9	chr11:102301200-102320800	Weak transcription	Left Ventricle	heart
10	chr11:102301400-102316200	Weak transcription	Duodenum Mucosa	Duodenum
11	chr11:102301400-102316600	Weak transcription	NHLF	lung
12	chr11:102301400-102319800	Weak transcription	Pancreas	Pancrea
13	chr11:102301400-102320600	Weak transcription	Right Ventricle	heart
14	chr11:102301400-102320800	Weak transcription	Adipose Nuclei	Adipose
15	chr11:102301400-102321000	Weak transcription	Stomach Smooth Muscle	stomach
16	chr11:102301400-102322400	Weak transcription	Spleen	Spleen
17	chr11:102301600-102307400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
18	chr11:102301600-102307600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr11:102301600-102308400	Weak transcription	Rectal Smooth Muscle	rectum
20	chr11:102301600-102309000	Weak transcription	Muscle Satellite Cultured Cells	--
21	chr11:102301600-102316600	Weak transcription	Sigmoid Colon	Sigmoid Colon
22	chr11:102301800-102305800	Weak transcription	Brain Substantia Nigra	brain
23	chr11:102301800-102306200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
24	chr11:102301800-102309200	Weak transcription	Colon Smooth Muscle	Colon
25	chr11:102301800-102309600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr11:102301800-102316800	Weak transcription	HSMMtube	muscle
27	chr11:102302200-102305800	ZNF genes & repeats	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr11:102302200-102306600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell
29	chr11:102302400-102307400	Weak transcription	Brain Anterior Caudate	brain
30	chr11:102302400-102308600	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
31	chr11:102302400-102309600	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
32	chr11:102302400-102309600	ZNF genes & repeats	GM12878-XiMat	blood
33	chr11:102302400-102318000	Weak transcription	Small Intestine	intestine
34	chr11:102302600-102306200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
35	chr11:102302600-102306400	ZNF genes & repeats	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
36	chr11:102302600-102306400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
37	chr11:102302600-102306600	ZNF genes & repeats	Primary hematopoietic stem cells short term culture	blood
38	chr11:102302600-102307600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
39	chr11:102302800-102307600	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
40	chr11:102303000-102306800	Strong transcription	Monocytes-CD14+_RO01746	blood
41	chr11:102303400-102306600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
42	chr11:102303400-102306600	ZNF genes & repeats	Dnd41	blood
43	chr11:102303600-102306600	ZNF genes & repeats	iPS-20b Cell Line	embryonic stem cell
44	chr11:102303800-102306000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
45	chr11:102303800-102309000	Strong transcription	HepG2	liver
46	chr11:102304000-102306000	Weak transcription	Primary T helper cells PMA-I stimulated	--
47	chr11:102304000-102307400	Weak transcription	Rectal Mucosa Donor 29	rectum
48	chr11:102304000-102307800	Weak transcription	Liver	Liver
49	chr11:102304000-102308400	Weak transcription	Brain Hippocampus Middle	brain
50	chr11:102304000-102308600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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