The 2.0 version of rSNPBase

Variant report

Variant rs377586924
Chromosome Location chr6:37141848-37141849
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37138000-37143200 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
2 chr6:37138200-37142000 Flanking Active TSS Primary hematopoietic stem cells blood
3 chr6:37138200-37143400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
4 chr6:37138200-37143400 Transcr. at gene 5' and 3' Dnd41 blood
5 chr6:37138200-37143800 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
6 chr6:37138200-37144000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
7 chr6:37138600-37143600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr6:37138600-37144400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
9 chr6:37138800-37142800 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
10 chr6:37138800-37144000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr6:37138800-37145000 Transcr. at gene 5' and 3' K562 blood
12 chr6:37139000-37143200 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
13 chr6:37139000-37143600 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
14 chr6:37139800-37143200 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum
15 chr6:37140000-37144000 Weak transcription HSMM muscle
16 chr6:37140200-37142400 Transcr. at gene 5' and 3' HepG2 liver
17 chr6:37140200-37142600 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
18 chr6:37140200-37142600 Transcr. at gene 5' and 3' Primary T killer naive cells fromperipheralblood blood
19 chr6:37140200-37142600 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
20 chr6:37140200-37143000 Transcr. at gene 5' and 3' Esophagus oesophagus
21 chr6:37140200-37143200 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
22 chr6:37140200-37143600 Transcr. at gene 5' and 3' Primary T cells effector/memory enriched fromperipheralblood blood
23 chr6:37140200-37143600 Transcr. at gene 5' and 3' Primary Natural Killer cells fromperipheralblood blood
24 chr6:37140200-37143800 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
25 chr6:37140400-37142600 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
26 chr6:37140400-37142600 Strong transcription Fetal Kidney kidney
27 chr6:37140400-37142600 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
28 chr6:37140400-37143000 Strong transcription Aorta Aorta
29 chr6:37140400-37143200 Strong transcription H9 Cell Line embryonic stem cell
30 chr6:37140400-37143200 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
31 chr6:37140400-37143400 Genic enhancers Primary B cells from peripheral blood blood
32 chr6:37140400-37143400 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 2 blood
33 chr6:37140400-37143400 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
34 chr6:37140600-37142000 Genic enhancers Fetal Muscle Leg muscle
35 chr6:37140600-37142000 Genic enhancers Spleen Spleen
36 chr6:37140600-37142600 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
37 chr6:37140600-37142600 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
38 chr6:37140600-37142600 Genic enhancers Breast Myoepithelial Primary Cells Breast
39 chr6:37140600-37142600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr6:37140600-37142600 Genic enhancers Brain Dorsolateral Prefrontal Cortex brain
41 chr6:37140600-37142600 Genic enhancers Colon Smooth Muscle Colon
42 chr6:37140600-37142800 Strong transcription HSMMtube muscle
43 chr6:37140600-37143000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr6:37140600-37143000 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 1 blood
45 chr6:37140600-37143000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr6:37140600-37143200 Strong transcription Gastric stomach
47 chr6:37140600-37143400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr6:37140600-37143600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr6:37140600-37143600 Genic enhancers Primary monocytes fromperipheralblood blood
50 chr6:37140600-37143600 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015