Variant report

Variant rs3776695
Chromosome Location chr5:53360059-53360060
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:53316200-53387400 Weak transcription Left Ventricle heart
2 chr5:53337400-53366400 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr5:53341800-53364400 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr5:53343000-53368000 Weak transcription Pancreas Pancrea
5 chr5:53343600-53376400 Weak transcription K562 blood
6 chr5:53346000-53371200 Weak transcription Aorta Aorta
7 chr5:53346200-53363600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr5:53346400-53365600 Weak transcription Fetal Stomach stomach
9 chr5:53350200-53360400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr5:53355800-53366400 Weak transcription Fetal Intestine Large intestine
11 chr5:53356600-53369200 Weak transcription Fetal Lung lung
12 chr5:53357000-53408000 Weak transcription Primary T helper cells fromperipheralblood blood
13 chr5:53357400-53363800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr5:53357600-53360200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
15 chr5:53357800-53366000 Weak transcription Fetal Intestine Small intestine
16 chr5:53357800-53369600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr5:53358000-53360800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:53358200-53368800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr5:53358400-53360400 Enhancers NHEK skin
20 chr5:53358400-53360600 Enhancers ES-I3 Cell Line embryonic stem cell
21 chr5:53358600-53360200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr5:53358600-53360200 Enhancers HUES64 Cell Line embryonic stem cell
23 chr5:53358600-53360400 Enhancers HUES48 Cell Line embryonic stem cell
24 chr5:53358600-53360400 Enhancers iPS-18 Cell Line embryonic stem cell
25 chr5:53358600-53360400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr5:53358600-53360400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr5:53358600-53360400 Enhancers HMEC breast
28 chr5:53358600-53360400 Enhancers HSMM muscle
29 chr5:53358600-53360400 Enhancers NHLF lung
30 chr5:53358600-53369600 Weak transcription Gastric stomach
31 chr5:53359000-53360400 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr5:53359000-53360400 Enhancers iPS-20b Cell Line embryonic stem cell
33 chr5:53359400-53360600 Enhancers A549 lung
34 chr5:53359400-53362800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr5:53359400-53363600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr5:53359400-53363600 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr5:53359400-53363800 Weak transcription Fetal Heart heart
38 chr5:53359400-53366200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
39 chr5:53359400-53379800 Weak transcription Breast Myoepithelial Primary Cells Breast
40 chr5:53359400-53380200 Weak transcription Primary T cells from cord blood blood
41 chr5:53359600-53360400 Enhancers Muscle Satellite Cultured Cells --
42 chr5:53359600-53360400 Enhancers NH-A brain
43 chr5:53359600-53360400 Enhancers NHDF-Ad bronchial
44 chr5:53359800-53360400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr5:53359800-53360400 Enhancers Osteobl bone
46 chr5:53359800-53364000 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr5:53360000-53360200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin

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