Variant report

Variant	rs377669783
Chromosome Location	chr11:59397981-59397982
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:59396061..59398307-chr11:59402162..59404297,2	K562	blood:
2	chr11:59388045..59390986-chr11:59397842..59400769,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1797571	chr11:59383323-59424688	Strong transcription Flanking Active TSS Weak transcription Active TSS Genic enhancers Enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
2	esv1797737	chr11:59383323-59424688	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	11 gene(s)	inside rSNPs	diseases
3	esv1802782	chr11:59383323-59448068	Genic enhancers Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	30 gene(s)	inside rSNPs	diseases
4	nsv832172	chr11:59396407-59431115	Genic enhancers Strong transcription Weak transcription Enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:98 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:59384400-59402600	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr11:59384400-59404400	Weak transcription	Brain Cingulate Gyrus	brain
3	chr11:59384800-59402600	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr11:59384800-59402800	Weak transcription	Duodenum Mucosa	Duodenum
5	chr11:59384800-59404600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
6	chr11:59384800-59404800	Weak transcription	Brain Angular Gyrus	brain
7	chr11:59385000-59404400	Weak transcription	Pancreatic Islets	Pancreatic Islet
8	chr11:59385000-59404800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
9	chr11:59385400-59402800	Weak transcription	Skeletal Muscle Female	skeletal muscle
10	chr11:59385400-59402800	Weak transcription	Dnd41	blood
11	chr11:59385400-59403000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
12	chr11:59385400-59404200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
13	chr11:59385600-59403000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr11:59386600-59402800	Weak transcription	Placenta	Placenta
15	chr11:59391200-59402400	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr11:59391800-59402200	Weak transcription	Primary B cells from cord blood	blood
17	chr11:59392000-59402600	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
18	chr11:59392400-59403600	Weak transcription	NHDF-Ad	bronchial
19	chr11:59392800-59402800	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
20	chr11:59392800-59403000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
21	chr11:59392800-59403200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr11:59393000-59402800	Weak transcription	Primary B cells from peripheral blood	blood
23	chr11:59393200-59402600	Weak transcription	Primary hematopoietic stem cells	blood
24	chr11:59393200-59402600	Weak transcription	NHEK	skin
25	chr11:59393200-59404200	Weak transcription	H1 Cell Line	embryonic stem cell
26	chr11:59393400-59402600	Weak transcription	Spleen	Spleen
27	chr11:59393400-59402800	Weak transcription	Primary T helper cells fromperipheralblood	blood
28	chr11:59393400-59403400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
29	chr11:59393600-59402600	Weak transcription	Rectal Mucosa Donor 31	rectum
30	chr11:59393600-59402800	Weak transcription	Fetal Intestine Large	intestine
31	chr11:59393600-59403200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr11:59393600-59403400	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr11:59393600-59403600	Weak transcription	HUES48 Cell Line	embryonic stem cell
34	chr11:59393600-59404200	Weak transcription	H9 Cell Line	embryonic stem cell
35	chr11:59393600-59408200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
36	chr11:59393800-59403000	Weak transcription	Colon Smooth Muscle	Colon
37	chr11:59393800-59403400	Weak transcription	HUES64 Cell Line	embryonic stem cell
38	chr11:59393800-59404200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
39	chr11:59394000-59402200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr11:59394200-59403200	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr11:59394400-59402600	Weak transcription	Primary T cells fromperipheralblood	blood
42	chr11:59394400-59402600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
43	chr11:59394600-59402800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr11:59394600-59403200	Weak transcription	Left Ventricle	heart
45	chr11:59394600-59404800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
46	chr11:59394800-59402600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
47	chr11:59395000-59404000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
48	chr11:59395200-59402800	Weak transcription	HSMMtube	muscle
49	chr11:59395200-59403200	Weak transcription	Aorta	Aorta
50	chr11:59395200-59404400	Weak transcription	Fetal Lung	lung

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