Variant report
| Variant | rs3776972 |
|---|---|
| Chromosome Location | chr5:80007751-80007752 |
| allele | G/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:79951600-80015600 | Weak transcription | Small Intestine | intestine |
| 2 | chr5:79956400-80015600 | Weak transcription | Psoas Muscle | Psoas |
| 3 | chr5:79962800-80015600 | Weak transcription | A549 | lung |
| 4 | chr5:79963600-80038600 | Weak transcription | Right Ventricle | heart |
| 5 | chr5:79964800-80057800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 6 | chr5:79965000-80021400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 7 | chr5:79969600-80010600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 8 | chr5:79971600-80022200 | Weak transcription | HMEC | breast |
| 9 | chr5:79971800-80015400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 10 | chr5:79971800-80112400 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 11 | chr5:79972400-80010400 | Weak transcription | NHEK | skin |
| 12 | chr5:79972400-80037000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 13 | chr5:79973200-80021600 | Weak transcription | NH-A | brain |
| 14 | chr5:79973400-80008800 | Weak transcription | Brain Anterior Caudate | brain |
| 15 | chr5:79974000-80021200 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 16 | chr5:79975200-80022800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 17 | chr5:79975600-80015200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 18 | chr5:79975600-80022000 | Weak transcription | Rectal Smooth Muscle | rectum |
| 19 | chr5:79975800-80008800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 20 | chr5:79975800-80009200 | Weak transcription | Pancreas | Pancrea |
| 21 | chr5:79975800-80015600 | Weak transcription | Brain Substantia Nigra | brain |
| 22 | chr5:79975800-80015800 | Weak transcription | Fetal Brain Female | brain |
| 23 | chr5:79976000-80010400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 24 | chr5:79979200-80013800 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 25 | chr5:79979800-80009000 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 26 | chr5:79979800-80015600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 27 | chr5:79980000-80015800 | Weak transcription | Fetal Kidney | kidney |
| 28 | chr5:79983400-80021600 | Weak transcription | Brain Angular Gyrus | brain |
| 29 | chr5:79985000-80100600 | Weak transcription | Brain Germinal Matrix | brain |
| 30 | chr5:79992400-80021000 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 31 | chr5:79994400-80016000 | Weak transcription | Colon Smooth Muscle | Colon |
| 32 | chr5:79995800-80007800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 33 | chr5:79997000-80009600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 34 | chr5:79997400-80009200 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 35 | chr5:79998400-80021400 | Weak transcription | K562 | blood |
| 36 | chr5:79998400-80021600 | Weak transcription | Spleen | Spleen |
| 37 | chr5:79998600-80008600 | Weak transcription | Brain Hippocampus Middle | brain |
| 38 | chr5:79998600-80015600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 39 | chr5:79998600-80051000 | Weak transcription | Fetal Brain Male | brain |
| 40 | chr5:79998800-80022200 | Weak transcription | Gastric | stomach |
| 41 | chr5:79998800-80109400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 42 | chr5:79999800-80021200 | Weak transcription | Placenta | Placenta |
| 43 | chr5:80000000-80010600 | Weak transcription | HSMM | muscle |
| 44 | chr5:80000000-80015600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 45 | chr5:80000000-80021200 | Weak transcription | Osteobl | bone |
| 46 | chr5:80000200-80010600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 47 | chr5:80000200-80021400 | Weak transcription | HSMMtube | muscle |
| 48 | chr5:80000200-80021600 | Weak transcription | Colonic Mucosa | Colon |
| 49 | chr5:80000200-80038600 | Weak transcription | Esophagus | oesophagus |
| 50 | chr5:80000400-80008800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
