Variant report

Variant	rs377706730
Chromosome Location	chr2:141111586-141111587
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2754266	chr2:141023643-141270786	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv875185	chr2:141055080-141179257	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
3	nsv1002168	chr2:141056296-141157971	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
4	nsv459496	chr2:141111125-141151319	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a
5	nsv583189	chr2:141111125-141151319	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:141106200-141113600	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr2:141106800-141112200	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr2:141106800-141113000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
4	chr2:141107400-141113400	Weak transcription	HUES6 Cell Line	embryonic stem cell
5	chr2:141107600-141111600	Weak transcription	iPS-18 Cell Line	embryonic stem cell
6	chr2:141111000-141111600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr2:141111000-141111800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr2:141111000-141112000	Weak transcription	HUES64 Cell Line	embryonic stem cell
9	chr2:141111000-141112200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
10	chr2:141111200-141112400	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr2:141111400-141112000	Enhancers	Hela-S3	cervix
12	chr2:141111400-141114600	Enhancers	HUES48 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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