Variant report

Variant	rs377713253
Chromosome Location	chr1:222034473-222034474
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv469786	chr1:221855871-222040335	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
2	nsv482867	chr1:221855871-222040335	Enhancers Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Genic enhancers Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	9 gene(s)	inside rSNPs	diseases
3	nsv1002463	chr1:221863355-222095773	Active TSS Enhancers Weak transcription Strong transcription Transcr. at gene 5' and 3' Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
4	nsv535302	chr1:221863355-222095773	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	13 gene(s)	inside rSNPs	diseases
5	esv2520781	chr1:222033751-222035320	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv2194421	chr1:222033947-222034670	Weak transcription Enhancers	n/a	n/a	inside rSNPs	diseases
7	esv3486077	chr1:222034033-222034562	Weak transcription	n/a	n/a	inside rSNPs	diseases
8	esv3486074	chr1:222034054-222034582	Weak transcription	n/a	n/a	inside rSNPs	diseases
9	esv3321215	chr1:222034058-222034581	Weak transcription	n/a	n/a	inside rSNPs	diseases
10	esv3486073	chr1:222034070-222034531	Weak transcription	n/a	n/a	inside rSNPs	diseases
11	esv3486071	chr1:222034072-222034536	Weak transcription	n/a	n/a	inside rSNPs	diseases
12	esv3486076	chr1:222034075-222034512	Weak transcription	n/a	n/a	inside rSNPs	diseases
13	esv2858	chr1:222034076-222034517	Weak transcription	n/a	n/a	inside rSNPs	diseases
14	esv3321216	chr1:222034079-222034547	Weak transcription	n/a	n/a	inside rSNPs	diseases
15	esv3321219	chr1:222034084-222034544	Weak transcription	n/a	n/a	inside rSNPs	diseases
16	esv3486072	chr1:222034091-222034532	Weak transcription	n/a	n/a	inside rSNPs	diseases
17	esv3321214	chr1:222034095-222034499	Weak transcription	n/a	n/a	inside rSNPs	diseases
18	esv3321217	chr1:222034130-222034480	Weak transcription	n/a	n/a	inside rSNPs	diseases
19	esv3486070	chr1:222034142-222034475	Weak transcription	n/a	n/a	inside rSNPs	diseases
20	esv3321220	chr1:222034144-222034491	Weak transcription	n/a	n/a	inside rSNPs	diseases
21	esv3486078	chr1:222034144-222034491	Weak transcription	n/a	n/a	inside rSNPs	diseases
22	esv1254343	chr1:222034158-222034490	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:222019800-222047600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr1:222032400-222036600	Weak transcription	Fetal Muscle Leg	muscle
3	chr1:222032600-222038600	Weak transcription	HSMM	muscle
4	chr1:222032800-222038000	Weak transcription	NHDF-Ad	bronchial
5	chr1:222032800-222041600	Weak transcription	NHEK	skin
6	chr1:222032800-222041800	Weak transcription	Osteobl	bone
7	chr1:222033000-222038000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr1:222033000-222038000	Weak transcription	Muscle Satellite Cultured Cells	--
9	chr1:222033200-222038000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr1:222033200-222041600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
11	chr1:222033400-222039200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin

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