Variant report

Variant	rs377761497
Chromosome Location	chr15:83213618-83213619
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv427965	chr15:82741381-83310525	Enhancers Weak transcription Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
2	nsv428309	chr15:82741381-83310525	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	35 gene(s)	inside rSNPs	diseases
3	esv2758391	chr15:82879646-83310525	Bivalent Enhancer Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
4	esv2760046	chr15:82879646-83310525	Strong transcription Enhancers Active TSS Weak transcription Bivalent Enhancer Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
5	nsv428645	chr15:83069951-83227151	Strong transcription Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
6	esv10828	chr15:83096440-83219640	Weak transcription Strong transcription Genic enhancers Enhancers	TF binding region CpG island Chromatin interactive region lncRNA	12 gene(s)	inside rSNPs	diseases
7	nsv1035899	chr15:83108446-83315731	Flanking Bivalent TSS/Enh Flanking Active TSS Enhancers Weak transcription Strong transcription Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	18 gene(s)	inside rSNPs	diseases
8	nsv833071	chr15:83123646-83310510	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Strong transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	15 gene(s)	inside rSNPs	diseases
9	esv3444210	chr15:83169297-83214995	Weak transcription Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
10	esv3312436	chr15:83169797-83214445	Weak transcription Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
11	esv3312437	chr15:83169797-83214445	Weak transcription Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases
12	esv3384594	chr15:83177247-83214845	Weak transcription Strong transcription	TF binding region Chromatin interactive region	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:83212400-83214000	Weak transcription	Brain Angular Gyrus	brain
2	chr15:83212400-83214000	Weak transcription	Brain Anterior Caudate	brain
3	chr15:83212400-83214000	Weak transcription	Brain Cingulate Gyrus	brain
4	chr15:83212400-83214000	Weak transcription	Stomach Smooth Muscle	stomach
5	chr15:83212600-83214200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr15:83212600-83214200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
7	chr15:83212600-83214200	Weak transcription	Brain Hippocampus Middle	brain
8	chr15:83212600-83214200	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr15:83212600-83214200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
10	chr15:83212600-83214200	Weak transcription	K562	blood
11	chr15:83213000-83215400	Weak transcription	Brain Substantia Nigra	brain
12	chr15:83213000-83217200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
13	chr15:83213200-83217400	Weak transcription	Duodenum Smooth Muscle	Duodenum
14	chr15:83213200-83220600	Weak transcription	Skeletal Muscle Male	skeletal muscle
15	chr15:83213600-83218600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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