Variant report

Variant rs3778377
Chromosome Location chr6:167017867-167017868
allele C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:167011000-167021000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr6:167012000-167023600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
3 chr6:167012200-167023400 Weak transcription iPS-20b Cell Line embryonic stem cell
4 chr6:167012400-167025000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:167012400-167034400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr6:167012600-167025000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr6:167012600-167027600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr6:167012800-167027800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr6:167013200-167031000 Weak transcription Fetal Intestine Small intestine
10 chr6:167013400-167028800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr6:167013600-167027800 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr6:167013600-167028200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr6:167013800-167022400 Weak transcription Brain Cingulate Gyrus brain
14 chr6:167013800-167027000 Weak transcription Esophagus oesophagus
15 chr6:167013800-167027400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr6:167014000-167022200 Weak transcription Brain Hippocampus Middle brain
17 chr6:167014000-167025200 Weak transcription Right Atrium heart
18 chr6:167014000-167028000 Weak transcription Brain Anterior Caudate brain
19 chr6:167014200-167023400 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr6:167014200-167028400 Weak transcription Stomach Mucosa stomach
21 chr6:167014400-167027600 Weak transcription Brain Inferior Temporal Lobe brain
22 chr6:167015000-167018400 Strong transcription Muscle Satellite Cultured Cells --
23 chr6:167015000-167021000 Weak transcription NHDF-Ad bronchial
24 chr6:167015000-167028400 Weak transcription Osteobl bone
25 chr6:167015200-167021600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr6:167015600-167018600 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
27 chr6:167016000-167019400 Weak transcription Pancreas Pancrea
28 chr6:167016000-167021200 Weak transcription Left Ventricle heart
29 chr6:167016000-167022400 Weak transcription Ovary ovary
30 chr6:167016000-167027400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
31 chr6:167016000-167027800 Weak transcription Brain Angular Gyrus brain
32 chr6:167016000-167028200 Weak transcription Gastric stomach
33 chr6:167016000-167034400 Weak transcription Aorta Aorta
34 chr6:167016200-167019600 Weak transcription NHLF lung
35 chr6:167016200-167025800 Weak transcription Spleen Spleen
36 chr6:167016200-167028400 Weak transcription NH-A brain
37 chr6:167016600-167032800 Weak transcription Colon Smooth Muscle Colon
38 chr6:167016800-167030200 Weak transcription Brain Germinal Matrix brain
39 chr6:167017200-167018400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr6:167017200-167018800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
41 chr6:167017200-167019400 Weak transcription Psoas Muscle Psoas
42 chr6:167017200-167023600 Weak transcription Fetal Muscle Leg muscle
43 chr6:167017200-167023600 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr6:167017200-167028600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
45 chr6:167017200-167032200 Weak transcription H9 Cell Line embryonic stem cell
46 chr6:167017400-167018200 Weak transcription Lung lung
47 chr6:167017400-167019200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr6:167017400-167019400 Weak transcription Right Ventricle heart
49 chr6:167017400-167021200 Weak transcription Fetal Muscle Trunk muscle
50 chr6:167017400-167022400 Weak transcription Stomach Smooth Muscle stomach

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