Variant report

Variant rs3779456
Chromosome Location chr7:27214557-27214558
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:27209200-27219800 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
2 chr7:27211000-27217600 Transcr. at gene 5' and 3' H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr7:27212200-27214600 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr7:27212400-27215200 Active TSS HSMMtube muscle
5 chr7:27213000-27214600 Active TSS Rectal Smooth Muscle rectum
6 chr7:27213000-27214800 Bivalent Enhancer Primary B cells from peripheral blood blood
7 chr7:27213400-27214600 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
8 chr7:27213400-27218800 Weak transcription A549 lung
9 chr7:27213600-27214600 Bivalent Enhancer Primary T killer naive cells fromperipheralblood blood
10 chr7:27213600-27219200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
11 chr7:27213800-27214600 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
12 chr7:27213800-27215800 Bivalent Enhancer ES-UCSF4 Cell Line embryonic stem cell
13 chr7:27213800-27216400 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
14 chr7:27213800-27217000 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
15 chr7:27214000-27214600 Bivalent Enhancer Primary monocytes fromperipheralblood blood
16 chr7:27214000-27214600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr7:27214000-27215000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr7:27214000-27215200 Flanking Bivalent TSS/Enh Skeletal Muscle Male skeletal muscle
19 chr7:27214000-27215400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
20 chr7:27214000-27216000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
21 chr7:27214000-27217600 Flanking Active TSS Muscle Satellite Cultured Cells --
22 chr7:27214000-27218400 Flanking Active TSS HUVEC blood vessel
23 chr7:27214000-27219400 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr7:27214200-27214600 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
25 chr7:27214200-27214600 Bivalent Enhancer Primary T cells fromperipheralblood blood
26 chr7:27214200-27214600 Bivalent Enhancer Primary T helper memory cells from peripheral blood 1 blood
27 chr7:27214200-27214600 Bivalent Enhancer Primary T helper cells PMA-I stimulated --
28 chr7:27214200-27214600 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
29 chr7:27214200-27214600 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
30 chr7:27214200-27214600 Bivalent Enhancer Stomach Smooth Muscle stomach
31 chr7:27214200-27214800 Flanking Active TSS Primary hematopoietic stem cells blood
32 chr7:27214200-27214800 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 29 rectum
33 chr7:27214200-27215000 Flanking Active TSS Colonic Mucosa Colon
34 chr7:27214200-27215200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr7:27214200-27215200 Flanking Active TSS NHDF-Ad bronchial
36 chr7:27214200-27215400 Bivalent Enhancer Placenta Placenta
37 chr7:27214200-27215400 Flanking Active TSS HSMM muscle
38 chr7:27214200-27217600 Flanking Active TSS Rectal Mucosa Donor 31 rectum
39 chr7:27214200-27217800 Flanking Active TSS Osteobl bone
40 chr7:27214400-27214600 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
41 chr7:27214400-27214600 Flanking Bivalent TSS/Enh Adipose Nuclei Adipose
42 chr7:27214400-27214600 Flanking Bivalent TSS/Enh Fetal Kidney kidney
43 chr7:27214400-27214600 Flanking Bivalent TSS/Enh Hela-S3 cervix
44 chr7:27214400-27214600 Bivalent Enhancer Monocytes-CD14+_RO01746 blood
45 chr7:27214400-27214800 Flanking Active TSS Colon Smooth Muscle Colon
46 chr7:27214400-27214800 Enhancers Psoas Muscle Psoas
47 chr7:27214400-27215000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr7:27214400-27215000 Flanking Bivalent TSS/Enh Skeletal Muscle Female skeletal muscle
49 chr7:27214400-27215400 Enhancers Sigmoid Colon Sigmoid Colon
50 chr7:27214400-27216200 Enhancers Primary hematopoietic stem cells short term culture blood

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